Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 0.0e+00 1254.6 730 100.0
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 4.2e-293 1011.1 703 81.7
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 5.5e-293 1010.7 731 77.2
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 9.8e-258 893.6 704 70.6
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 3.6e-252 875.2 704 69.2
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.7e-249 866.3 704 68.8
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 6.6e-246 854.4 704 67.6
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.9e-245 852.8 722 66.6
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 5.6e-245 851.3 701 67.8
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 8.0e-244 847.4 699 67.8
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 5.7e-242 841.3 704 67.2
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 6.4e-241 837.8 733 65.2
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 8.3e-241 837.4 701 67.6
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 2.7e-239 832.4 700 67.7
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 2.3e-238 829.3 703 66.4
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.9e-237 826.2 701 66.6
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 5.6e-237 824.7 701 67.2
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 4.0e-235 818.5 706 66.6
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 2.0e-234 816.2 709 64.7
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 5.8e-234 814.7 705 65.5
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 9.2e-232 807.4 700 65.4
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 3.5e-231 805.4 705 64.3
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 3.6e-228 795.4 685 66.4
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 4.0e-227 792.0 701 66.9
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 5.2e-227 791.6 787 59.8
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 2.2e-225 786.2 697 63.4
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 3.7e-225 785.4 672 66.8
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 4.1e-224 781.9 702 66.8
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 1.6e-223 780.0 706 64.3
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 2.7e-223 779.2 696 64.2
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 7.8e-223 777.7 698 63.6
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.7e-222 776.5 699 63.4
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 3.0e-222 775.8 696 64.1
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.9e-221 773.1 704 62.2
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 2.5e-221 772.7 696 63.1
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 4.3e-221 771.9 706 63.5
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 9.5e-221 770.8 703 63.3
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 9.5e-221 770.8 676 65.2
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 2.1e-220 769.6 700 62.9
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.8e-220 769.2 699 62.8
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 1.4e-219 766.9 675 64.1
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 1.8e-219 766.5 707 61.5
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 3.1e-219 765.8 700 62.3
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 5.8e-218 761.5 671 64.2
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 9.9e-218 760.8 701 61.1
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 2.2e-217 759.6 699 64.7
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 6.4e-217 758.1 703 61.9
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 8.4e-217 757.7 703 63.0
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 8.4e-217 757.7 712 60.5
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 8.4e-217 757.7 703 61.9
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.2e-215 753.8 677 63.1
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.0e-214 750.7 672 63.2
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.3e-214 750.4 715 60.3
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 1.9e-213 746.5 702 61.7
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 2.5e-213 746.1 699 60.8
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 3.3e-213 745.7 704 60.4
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 3.3e-213 745.7 703 59.9
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 8.1e-212 741.1 704 60.1
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 2.4e-211 739.6 793 56.6
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 3.1e-211 739.2 707 60.4
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 6.9e-211 738.0 707 59.5
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 9.9e-210 734.2 703 59.2
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 3.8e-209 732.3 704 60.8
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.1e-208 730.7 710 59.9
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.7e-207 726.1 675 62.7
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 1.0e-206 724.2 697 61.4
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.0e-206 724.2 707 60.3
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 3.6e-204 715.7 710 58.9
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 4.8e-204 715.3 697 59.4
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 4.8e-204 715.3 706 63.3
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 8.4e-201 704.5 708 57.9
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 7.1e-200 701.4 675 63.4
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.0e-198 697.6 672 60.7
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 3.9e-198 695.7 710 57.7
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 3.9e-198 695.7 710 57.7
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 3.7e-196 689.1 674 61.1
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 4.9e-193 678.7 699 58.1
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.1e-192 677.6 719 56.6
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.1e-192 677.6 681 60.2
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 3.5e-191 672.5 701 61.3
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 6.0e-191 671.8 700 56.4
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 6.7e-190 668.3 668 59.6
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 7.4e-189 664.8 767 53.7
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 6.9e-187 658.3 703 55.8
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 6.5e-185 651.7 699 59.1
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 5.1e-182 642.1 754 53.3
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.0e-177 625.5 634 58.5
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 9.4e-176 621.3 690 53.5
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 3.2e-168 596.3 705 51.3
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 4.1e-155 552.7 696 49.3
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.1e-147 528.1 567 56.6
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.5e-141 507.7 577 52.5
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 2.2e-140 503.8 363 74.9
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 4.5e-138 496.1 359 73.8
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 7.0e-123 445.7 298 77.5
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 2.5e-120 437.2 282 82.6
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.6e-114 417.9 505 51.5
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 1.4e-110 404.8 401 59.6
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 6.4e-108 396.0 557 48.7
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 2.8e-103 380.6 409 57.0
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 3.5e-98 363.6 350 60.6
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 2.1e-87 327.8 703 35.3
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.8e-87 327.4 344 58.4
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 2.5e-75 287.7 271 63.1
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.1e-74 284.6 683 31.0
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 2.5e-72 277.7 410 44.6
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 7.4e-72 276.2 671 32.6
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 8.2e-71 272.7 728 32.8
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.1e-64 252.3 716 30.0
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 1.9e-64 251.5 471 40.1
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 4.1e-62 243.8 344 47.1
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 3.4e-61 240.7 671 33.8
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 5.7e-32 143.7 136 61.0
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.5e-27 129.0 84 71.4
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 2.6e-24 118.2 502 25.3
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 5.7e-24 117.1 74 79.7
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.3e-23 115.9 144 50.7
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 4.7e-18 97.4 109 51.4
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.5e-16 92.4 123 46.3
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 1.8e-14 85.5 94 48.9
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 3.2e-14 84.7 118 39.0
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.0e-14 83.6 54 83.3
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 7.0e-14 83.6 241 29.9
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 3.5e-13 81.3 107 50.5
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.3e-12 78.6 166 38.0
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 5.0e-12 77.4 70 62.9
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 1.9e-11 75.5 73 54.8
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 3.3e-11 74.7 67 59.7
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 9.5e-11 73.2 56 69.6
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 6.1e-10 70.5 135 37.8
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.4e-06 57.4 41 70.7


User provided reference genes

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