Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 7.5e-283 976.5 475 100.0
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 5.7e-182 641.3 476 66.2
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 1.5e-166 590.1 505 60.6
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 6.1e-144 515.0 521 51.8
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 8.1e-128 461.5 506 49.6
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 6.8e-127 458.4 506 49.8
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 2.9e-125 453.0 514 47.3
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.0e-122 444.5 518 46.7
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 2.8e-120 436.4 505 48.1
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 2.4e-119 433.3 509 45.4
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 6.8e-119 431.8 513 45.4
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 7.6e-118 428.3 509 46.2
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 2.9e-117 426.4 516 45.3
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 3.8e-117 426.0 514 46.5
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 6.4e-117 425.2 518 45.4
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 7.1e-116 421.8 533 44.8
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.6e-115 420.6 512 45.5
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 1.0e-114 417.9 521 44.0
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 5.1e-114 415.6 518 45.0
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.2e-112 411.0 514 45.9
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 4.0e-111 406.0 523 45.1
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 4.0e-111 406.0 504 44.6
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 9.0e-111 404.8 514 46.9
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 1.5e-110 404.1 506 45.7
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 5.8e-110 402.1 521 45.1
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.4e-108 397.5 511 44.0
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 1.9e-108 397.1 508 44.1
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.6e-107 394.0 507 44.4
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 2.7e-107 393.3 517 44.3
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 1.0e-106 391.3 511 43.6
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 1.3e-106 391.0 508 43.1
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 5.1e-106 389.0 512 43.2
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.5e-105 387.5 501 43.3
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 3.3e-105 386.3 458 45.9
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 7.3e-105 385.2 473 44.8
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 1.6e-104 384.0 506 43.5
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 2.8e-104 383.3 510 43.7
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 3.6e-104 382.9 508 42.7
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 8.1e-104 381.7 510 41.6
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 4.0e-103 379.4 511 42.7
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.3e-101 374.4 505 44.0
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 1.2e-99 367.9 509 43.0
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 3.5e-99 366.3 509 43.0
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 7.9e-99 365.2 466 43.6
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 7.9e-99 365.2 515 42.7
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 2.1e-96 357.1 508 39.6
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 3.1e-95 353.2 644 36.2
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 6.9e-95 352.1 514 41.6
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 1.3e-93 347.8 517 40.2
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 8.4e-93 345.1 461 44.7
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 1.4e-92 344.4 486 41.4
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.4e-92 344.4 660 35.8
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.2e-92 343.2 438 44.5
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 4.2e-92 342.8 512 40.6
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 8.2e-88 328.6 518 40.2
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 1.1e-87 328.2 508 38.4
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 1.8e-87 327.4 414 42.3
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 4.5e-86 322.8 369 47.2
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 5.8e-86 322.4 476 41.6
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 1.0e-85 321.6 515 40.6
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 1.7e-85 320.9 502 38.4
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 2.9e-85 320.1 389 45.0
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 3.8e-85 319.7 521 37.0
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 2.5e-84 317.0 511 39.9
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 2.5e-84 317.0 513 39.4
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 4.2e-84 316.2 515 39.4
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 5.5e-84 315.8 512 40.2
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 1.2e-83 314.7 518 38.0
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 2.1e-83 313.9 504 37.9
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 2.1e-83 313.9 358 47.2
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 1.8e-82 310.8 515 38.8
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 6.7e-82 308.9 505 37.4
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 1.9e-81 307.4 464 40.9
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 3.3e-81 306.6 477 39.0
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 4.3e-81 306.2 506 38.3
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 2.2e-80 303.9 511 38.7
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.1e-79 301.6 517 38.1
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 4.2e-76 289.7 499 37.3
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 3.6e-75 286.6 439 39.6
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.8e-74 284.3 250 58.8
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 3.3e-73 280.0 395 40.5
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 1.5e-70 271.2 505 38.0
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 1.3e-69 268.1 879 27.1
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 1.1e-68 265.0 439 38.5
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 5.1e-66 256.1 404 38.1
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 3.3e-65 253.4 447 37.1
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 8.2e-64 248.8 406 38.2
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 7.7e-62 242.3 212 59.4
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 2.6e-57 227.3 273 48.4
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 1.4e-55 221.5 448 34.2
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 5.5e-52 209.5 555 28.1
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 2.7e-51 207.2 254 46.1
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 2.4e-47 194.1 275 42.9
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 7.7e-46 189.1 171 53.8
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 2.2e-45 187.6 328 39.3
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 5.5e-44 183.0 314 36.0
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 5.2e-42 176.4 514 27.4
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 4.1e-39 166.8 282 36.9
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 5.4e-39 166.4 289 38.1
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 4.7e-35 153.3 486 27.0
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 1.8e-34 151.4 132 54.5
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 8.9e-34 149.1 133 57.1
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 1.5e-33 148.3 103 65.0
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.7e-29 134.8 115 56.5
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 2.9e-29 134.0 239 33.1
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 1.1e-28 132.1 584 24.5
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.1e-28 132.1 147 47.6
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 7.3e-28 129.4 310 31.3
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 1.2e-27 128.6 256 34.4
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 5.2e-26 123.2 134 50.7
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 3.2e-23 114.0 137 49.6
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 1.7e-13 81.6 131 36.6
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 1.5e-12 78.6 90 53.3
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 9.5e-12 75.9 70 51.4
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 2.8e-11 74.3 135 34.1
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 2.3e-10 71.2 266 26.7
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 3.4e-09 67.4 129 33.3
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 7.5e-09 66.2 139 34.5
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 7.5e-09 66.2 139 34.5
CiPaw.09G139700 Carya illinoinensis HOM05D005725 ORTHO05D007531 3.7e-08 63.9 141 33.3
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 3.2e-07 60.8 116 34.5
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 3.2e-07 60.8 116 34.5
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 3.2e-07 60.8 116 34.5
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 7.8e-06 56.2 134 26.9


User provided reference genes

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