Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 7.7e-98 360.5 188 100.0
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.0e-65 253.8 188 73.9
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 1.7e-65 253.1 199 71.9
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 3.8e-65 251.9 175 77.1
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 2.5e-64 249.2 198 71.7
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 2.5e-64 249.2 199 71.4
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 3.2e-64 248.8 194 74.7
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 7.2e-64 247.7 170 76.5
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 9.5e-64 247.3 192 70.3
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 4.7e-63 245.0 199 71.9
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.4e-62 243.4 188 71.3
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.8e-62 243.0 165 77.6
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 5.2e-62 241.5 175 75.4
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 6.8e-62 241.1 170 74.7
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 6.8e-62 241.1 195 69.2
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.5e-61 240.0 170 75.3
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 1.5e-61 240.0 170 74.7
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.6e-61 239.2 151 79.5
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 4.4e-61 238.4 175 74.3
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 4.4e-61 238.4 174 73.6
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.8e-61 237.3 200 71.5
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.7e-60 236.5 170 74.1
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.7e-60 236.5 185 70.3
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.8e-60 235.7 200 70.5
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.1e-59 233.8 198 69.7
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 1.4e-59 233.4 192 67.2
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.8e-59 233.0 164 75.6
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 4.1e-59 231.9 198 69.7
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 5.4e-59 231.5 189 67.7
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 5.4e-59 231.5 148 81.1
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 9.2e-59 230.7 175 72.0
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 9.2e-59 230.7 188 67.6
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.2e-58 230.3 160 77.5
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.2e-58 230.3 175 73.1
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 2.7e-58 229.2 188 67.6
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 2.7e-58 229.2 200 71.0
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 4.5e-58 228.4 199 69.3
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 4.5e-58 228.4 201 65.7
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 7.8e-58 227.6 170 71.8
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 7.8e-58 227.6 177 72.3
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 7.8e-58 227.6 188 67.0
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.0e-57 227.3 161 77.0
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.0e-57 227.3 175 71.4
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 1.0e-57 227.3 179 70.4
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 1.3e-57 226.9 138 82.6
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 1.7e-57 226.5 176 72.2
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 1.7e-57 226.5 140 85.0
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.7e-57 226.5 199 67.8
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 2.3e-57 226.1 189 67.7
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 2.3e-57 226.1 187 69.0
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 2.3e-57 226.1 173 71.1
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 2.9e-57 225.7 196 67.9
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 3.8e-57 225.3 199 68.3
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 5.0e-57 224.9 188 66.0
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 5.0e-57 224.9 171 70.8
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 6.6e-57 224.6 198 66.7
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 8.6e-57 224.2 145 80.0
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 8.6e-57 224.2 186 67.2
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.1e-56 223.8 159 77.4
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.1e-56 223.8 191 64.4
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.5e-56 223.4 156 76.3
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.9e-56 223.0 186 66.7
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 2.5e-56 222.6 174 69.0
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.3e-56 222.2 159 76.1
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.3e-56 222.2 159 76.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 4.3e-56 221.9 195 66.7
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 7.3e-56 221.1 171 70.8
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 7.3e-56 221.1 145 80.7
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 9.5e-56 220.7 184 66.8
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 2.1e-55 219.5 171 71.9
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 3.6e-55 218.8 185 64.3
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.7e-55 218.4 195 62.6
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 6.1e-55 218.0 152 77.6
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.4e-54 216.9 195 62.1
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.4e-54 216.9 195 62.1
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.8e-54 216.5 172 67.4
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 1.8e-54 216.5 188 66.5
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 1.8e-54 216.5 190 64.2
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.8e-54 216.5 177 68.4
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 2.3e-54 216.1 175 66.9
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 4.0e-54 215.3 176 69.3
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.2e-54 214.9 164 73.2
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 6.8e-54 214.5 202 61.9
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.5e-53 213.4 187 64.7
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 2.0e-53 213.0 171 70.2
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 3.4e-53 212.2 195 63.1
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 9.8e-53 210.7 190 64.7
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 9.8e-53 210.7 178 65.2
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.3e-52 210.3 170 69.4
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.3e-52 210.3 176 68.8
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.7e-52 209.9 181 68.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.7e-52 209.9 190 62.1
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 2.9e-52 209.1 195 62.6
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 3.7e-52 208.8 142 77.5
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 3.7e-52 208.8 142 77.5
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 3.7e-52 208.8 142 77.5
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 3.7e-52 208.8 142 77.5
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 4.9e-52 208.4 141 79.4
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 4.9e-52 208.4 141 78.0
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 6.4e-52 208.0 195 62.6
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.1e-51 207.2 191 63.9
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.8e-51 206.5 141 78.7
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 2.4e-51 206.1 141 78.0
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 2.4e-51 206.1 140 77.9
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 2.4e-51 206.1 192 63.5
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 5.4e-51 204.9 178 66.3
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 5.4e-51 204.9 141 75.9
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 5.4e-51 204.9 176 66.5
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 7.0e-51 204.5 177 64.4
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 9.2e-51 204.1 140 77.1
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 9.2e-51 204.1 164 67.1
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.2e-50 203.8 193 62.7
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.2e-50 203.8 193 59.1
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 1.6e-50 203.4 140 76.4
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.6e-50 203.4 135 78.5
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 3.5e-50 202.2 181 66.9
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 3.5e-50 202.2 141 75.2
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 4.6e-50 201.8 140 76.4
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 5.9e-50 201.4 149 72.5
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.0e-49 199.1 135 77.0
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.9e-49 198.7 133 79.7
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.5e-48 196.8 150 72.0
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 1.9e-48 196.4 171 64.3
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 3.3e-48 195.7 163 65.6
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 3.6e-47 192.2 168 64.9
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 8.0e-47 191.0 115 84.3
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 8.0e-47 191.0 140 68.6
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.4e-46 190.3 115 85.2
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.4e-46 190.3 115 85.2
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 3.1e-46 189.1 160 67.5
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 6.8e-46 188.0 113 84.1
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 1.2e-45 187.2 112 84.8
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.5e-45 186.8 140 73.6
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 5.8e-45 184.9 153 68.0
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 9.8e-45 184.1 142 69.0
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.3e-44 183.7 113 82.3
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 4.9e-44 181.8 127 77.2
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 8.3e-44 181.0 175 61.1
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.1e-43 180.6 108 82.4
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 3.2e-43 179.1 186 57.0
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.1e-43 178.7 142 66.2
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-42 177.2 183 55.2
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-42 177.2 174 58.6
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 2.0e-42 176.4 111 81.1
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.0e-42 176.4 188 56.9
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.7e-42 176.0 188 56.9
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.9e-41 172.2 163 62.0
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 3.3e-40 169.1 131 70.2
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 7.3e-40 167.9 113 75.2
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 9.5e-40 167.5 111 74.8
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 8.9e-38 161.0 167 58.7
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 8.9e-38 161.0 309 37.9
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 1.7e-36 156.8 192 53.6
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 5.4e-35 151.8 119 65.5
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.0e-33 147.5 135 64.4
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 3.5e-26 122.5 105 58.1
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 8.6e-25 117.9 137 48.9
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.5e-24 117.1 95 65.3
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 4.0e-22 109.0 91 67.0
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.0e-22 109.0 91 65.9
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 6.9e-22 108.2 94 63.8
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 4.4e-21 105.5 85 67.1
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-20 104.0 86 68.6
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 8.4e-20 101.3 86 67.4
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 8.4e-20 101.3 86 67.4
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.9e-19 100.1 113 54.0
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.2e-13 80.9 47 85.1
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.3e-12 77.4 49 81.6
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 2.2e-12 76.6 44 86.4
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 2.5e-08 63.2 38 78.9
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.1e-06 56.2 95 36.8
AagrBONN_evm.TU.Sc2ySwM_362.2265 Anthoceros agrestis HOM05D010958 ORTHO05D004381 9.0e-06 54.7 97 35.1


User provided reference genes

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