Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 2.5e-119 432.2 228 100.0
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.7e-75 286.6 211 71.1
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.7e-75 286.6 211 71.1
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 1.4e-72 276.9 210 70.5
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 1.9e-66 256.5 207 67.1
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 5.3e-61 238.4 206 65.0
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 1.5e-58 230.3 216 59.3
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 8.0e-57 224.6 210 59.0
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 3.0e-56 222.6 205 57.6
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 3.0e-56 222.6 203 59.1
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 6.7e-56 221.5 186 62.4
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 8.8e-56 221.1 187 62.6
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 1.1e-55 220.7 196 59.2
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 3.3e-55 219.2 207 58.5
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 4.4e-55 218.8 210 56.7
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 9.7e-55 217.6 186 62.4
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 1.3e-54 217.2 208 58.7
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 1.4e-53 213.8 214 56.1
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 2.4e-53 213.0 147 76.2
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 4.1e-53 212.2 188 59.6
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 5.0e-51 205.3 183 58.5
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 5.5e-50 201.8 211 55.9
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 9.4e-50 201.1 200 53.5
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 1.6e-49 200.3 199 52.8
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 2.1e-49 199.9 195 53.8
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 2.1e-49 199.9 208 54.8
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 3.6e-49 199.1 208 52.9
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 3.6e-49 199.1 184 56.0
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 6.1e-49 198.4 230 50.4
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 1.0e-48 197.6 203 52.7
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 1.0e-48 197.6 198 54.5
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 1.4e-48 197.2 210 52.4
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 3.0e-48 196.1 202 53.5
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 5.2e-48 195.3 214 50.0
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 6.8e-48 194.9 201 50.7
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 6.8e-48 194.9 211 52.6
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 1.5e-47 193.7 193 52.8
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 2.0e-47 193.4 194 56.7
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 2.0e-47 193.4 184 54.3
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 3.4e-47 192.6 187 54.0
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 5.7e-47 191.8 215 51.6
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 5.7e-47 191.8 201 50.2
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 5.7e-47 191.8 201 50.2
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 5.7e-47 191.8 200 50.5
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 1.7e-46 190.3 202 54.5
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 1.7e-46 190.3 207 51.2
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 2.2e-46 189.9 202 51.5
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 3.7e-46 189.1 197 51.8
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 3.7e-46 189.1 188 53.7
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 4.8e-46 188.7 207 51.7
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.1e-45 187.6 204 50.0
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 1.4e-45 187.2 200 50.5
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 1.8e-45 186.8 190 53.2
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 3.1e-45 186.0 211 49.3
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 5.4e-45 185.3 202 47.5
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 2.0e-44 183.3 217 50.2
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 2.7e-44 183.0 173 53.8
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 3.5e-44 182.6 197 52.8
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 7.7e-44 181.4 207 49.8
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 1.3e-43 180.6 178 52.2
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 5.0e-43 178.7 206 53.4
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 1.5e-42 177.2 209 48.3
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 7.2e-42 174.9 209 48.3
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 1.6e-41 173.7 204 48.5
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 1.6e-41 173.7 209 47.4
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 2.1e-41 173.3 207 46.4
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 4.7e-41 172.2 205 47.8
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 4.7e-41 172.2 199 52.3
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 1.4e-40 170.6 199 53.8
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 3.0e-40 169.5 206 51.5
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 3.0e-40 169.5 215 45.1
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 6.8e-40 168.3 199 51.3
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 4.4e-39 165.6 186 49.5
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 2.2e-38 163.3 200 44.5
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 2.8e-38 162.9 198 48.0
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 1.4e-37 160.6 193 52.3
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 3.1e-37 159.5 197 49.2
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 9.1e-37 157.9 211 47.4
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 1.2e-36 157.5 188 45.2
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 2.0e-36 156.8 205 42.9
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 2.0e-36 156.8 208 42.8
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 2.7e-36 156.4 270 38.5
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 3.5e-36 156.0 205 42.9
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 5.9e-36 155.2 205 45.4
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 1.7e-35 153.7 208 41.8
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 1.7e-35 153.7 185 44.3
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 2.3e-35 153.3 206 42.7
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 2.3e-35 153.3 206 42.7
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 2.3e-35 153.3 197 45.7
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 2.3e-35 153.3 197 45.7
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 5.0e-35 152.1 208 41.8
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 5.0e-35 152.1 206 42.2
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 8.6e-35 151.4 206 42.7
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 1.1e-34 151.0 126 64.3
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 2.5e-34 149.8 205 45.4
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 4.2e-34 149.1 211 42.7
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 2.1e-33 146.7 220 45.0
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 8.0e-33 144.8 118 65.3
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 1.4e-32 144.1 129 50.4
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.4e-32 144.1 176 49.4
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 6.8e-32 141.7 176 48.9
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 2.6e-31 139.8 151 56.3
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 7.5e-31 138.3 213 41.3
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 1.6e-28 130.6 175 40.6
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 3.1e-24 116.3 109 53.2
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 6.8e-24 115.2 176 40.9
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 1.2e-23 114.4 170 38.8
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 2.9e-22 109.8 204 38.2
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 1.9e-21 107.1 204 36.8
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 1.2e-20 104.4 88 61.4
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 3.0e-19 99.8 91 54.9
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 2.1e-17 93.6 202 36.1
ATR0737G097 Amborella trichopoda HOM05D006968 ORTHO05D008748 4.9e-14 82.4 150 35.3
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 8.3e-14 81.6 135 40.0
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 7.3e-10 68.6 133 40.6
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 1.8e-08 63.9 65 55.4
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 2.3e-08 63.5 90 43.3
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 1.5e-07 60.8 64 56.2


User provided reference genes

Program Settings