Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 1.2e-186 656.4 330 100.0
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 4.6e-122 441.8 388 61.3
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 5.8e-117 424.9 284 73.6
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 1.7e-113 413.3 286 75.2
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 6.4e-108 394.8 289 69.2
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.5e-96 357.1 285 63.9
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 4.3e-96 355.5 282 64.2
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 1.4e-94 350.5 286 62.6
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.8e-94 350.1 292 60.6
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.8e-94 350.1 292 60.6
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.0e-92 344.4 288 59.0
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.3e-92 344.0 282 59.9
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 2.2e-92 343.2 301 59.8
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 2.2e-92 343.2 285 61.4
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 2.9e-92 342.8 282 61.0
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.1e-91 340.9 282 61.3
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.2e-90 337.4 282 60.3
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.6e-90 337.0 288 56.2
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 4.6e-90 335.5 284 59.5
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 7.9e-90 334.7 282 58.9
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 8.7e-89 331.3 282 59.9
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.9e-88 330.1 282 58.5
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.9e-88 330.1 283 59.0
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.9e-88 330.1 283 59.0
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 3.3e-88 329.3 282 58.2
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.3e-87 327.4 284 57.4
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 1.6e-87 327.0 306 56.2
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.8e-87 326.2 295 55.9
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.8e-86 323.6 282 58.5
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 5.3e-86 322.0 283 57.2
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 6.9e-86 321.6 287 55.7
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 9.0e-86 321.2 286 58.0
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 2.0e-85 320.1 283 58.7
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 4.5e-85 318.9 282 56.0
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 4.5e-85 318.9 284 57.0
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.7e-84 317.0 287 56.1
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.2e-84 316.6 289 56.4
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 2.2e-84 316.6 286 55.6
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 2.9e-84 316.2 283 58.0
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.9e-84 316.2 284 54.2
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.8e-84 315.8 282 55.3
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 6.5e-84 315.1 284 56.3
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 8.5e-84 314.7 282 56.4
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.4e-83 313.9 282 57.4
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 3.2e-83 312.8 282 56.7
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 3.2e-83 312.8 287 55.4
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 4.2e-83 312.4 285 56.8
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 5.5e-83 312.0 284 53.9
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 5.5e-83 312.0 282 58.2
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 3.6e-82 309.3 282 55.3
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 4.6e-82 308.9 282 57.4
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 6.1e-82 308.5 285 54.4
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 1.0e-81 307.8 292 55.5
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.8e-81 307.0 282 55.0
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 2.3e-81 306.6 282 56.7
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 5.1e-81 305.4 283 53.4
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 1.5e-80 303.9 283 54.8
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.5e-80 303.9 282 54.6
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 4.3e-80 302.4 302 53.0
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 7.4e-80 301.6 317 51.1
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 1.3e-79 300.8 287 54.0
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 3.7e-79 299.3 283 53.0
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 6.3e-79 298.5 282 52.5
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.1e-78 297.7 294 53.7
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 2.4e-78 296.6 301 51.2
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 5.3e-78 295.4 298 50.0
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 9.1e-78 294.7 304 51.0
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 9.1e-78 294.7 283 54.8
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 2.6e-77 293.1 304 51.6
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 7.7e-77 291.6 292 52.4
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 1.3e-76 290.8 291 51.9
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 1.7e-76 290.4 291 52.6
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 5.0e-76 288.9 287 48.8
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 2.7e-74 283.1 304 50.3
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 4.7e-74 282.3 296 52.4
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.3e-71 274.2 193 65.8
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.2e-71 273.5 258 54.3
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 1.9e-67 260.4 256 54.7
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 1.6e-66 257.3 250 51.6
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 4.4e-64 249.2 214 56.1
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 5.9e-61 238.8 247 52.2
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.4e-57 227.6 273 46.2
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.3e-52 211.1 224 49.6
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.9e-52 209.9 284 42.6
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 3.8e-52 209.5 244 48.4
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 9.5e-43 178.3 278 37.8
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 9.5e-43 178.3 125 64.0
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 4.1e-38 162.9 123 55.3
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 5.0e-36 156.0 168 51.8
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 5.2e-33 146.0 96 65.6
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 9.2e-30 135.2 205 44.4
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 1.6e-29 134.4 183 45.9
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 1.1e-25 121.7 171 41.5
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 5.8e-24 115.9 137 48.9
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.7e-12 77.8 86 50.0
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.3e-12 77.4 91 47.3
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 3.4e-08 63.5 82 42.7
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 3.2e-06 57.0 90 46.7


User provided reference genes

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