Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 2.9e-182 641.7 321 100.0
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 2.8e-100 369.4 312 64.4
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 2.3e-86 323.2 263 62.4
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 3.5e-82 309.3 292 56.5
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 4.5e-82 308.9 207 70.5
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.7e-81 307.0 216 68.5
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 3.8e-81 305.8 254 62.6
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.1e-80 304.3 205 71.2
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.5e-80 303.9 252 61.1
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 7.2e-80 301.6 217 68.2
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 7.2e-80 301.6 273 59.0
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.2e-79 300.8 263 57.8
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.2e-79 300.8 263 56.7
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 2.7e-79 299.7 285 57.9
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 8.0e-79 298.1 275 58.2
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 8.0e-79 298.1 291 55.3
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.8e-78 297.0 211 65.4
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 3.0e-78 296.2 263 55.5
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.0e-77 293.5 222 63.5
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 2.6e-77 293.1 215 64.7
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 4.4e-77 292.4 216 64.4
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 4.4e-77 292.4 216 64.8
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 4.4e-77 292.4 216 66.2
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 4.4e-77 292.4 216 66.2
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.3e-76 290.8 215 63.7
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 1.3e-76 290.8 276 55.8
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.7e-76 290.4 247 59.1
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 2.2e-76 290.0 238 57.6
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 3.7e-76 289.3 206 64.1
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 3.7e-76 289.3 202 66.8
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 3.7e-76 289.3 242 57.9
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 6.3e-76 288.5 245 57.6
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 8.3e-76 288.1 286 53.8
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.1e-75 287.7 204 66.2
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 1.8e-75 287.0 264 53.4
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.8e-75 287.0 195 69.7
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 4.1e-75 285.8 217 61.8
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 5.3e-75 285.4 217 60.4
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 5.3e-75 285.4 255 55.7
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 9.1e-75 284.6 265 54.0
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.2e-74 284.3 217 61.8
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.6e-74 283.9 221 62.0
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 2.7e-74 283.1 274 52.2
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 3.5e-74 282.7 219 61.2
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.3e-73 280.8 216 60.6
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 1.3e-73 280.8 239 57.3
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.7e-73 280.4 280 52.5
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 5.0e-73 278.9 219 60.3
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 5.0e-73 278.9 256 54.3
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 6.5e-73 278.5 239 56.9
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 6.5e-73 278.5 219 62.1
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 8.5e-73 278.1 221 61.1
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.9e-72 276.9 219 59.8
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.9e-72 276.9 220 60.9
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 2.5e-72 276.6 260 53.8
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.2e-72 276.2 219 59.4
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 8.0e-71 271.6 203 61.6
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 3.0e-70 269.6 266 52.3
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 8.8e-70 268.1 258 50.4
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.0e-69 266.9 240 53.8
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 7.5e-69 265.0 221 62.9
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.7e-68 263.8 205 58.5
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.8e-68 263.1 230 57.4
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 3.1e-67 259.6 205 59.5
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 9.1e-67 258.1 206 57.3
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 3.5e-66 256.1 264 50.4
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 4.5e-66 255.8 266 47.4
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 5.0e-65 252.3 190 61.1
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 7.2e-64 248.4 182 63.7
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 9.5e-64 248.1 278 49.6
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 3.6e-63 246.1 182 63.7
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.8e-62 243.8 206 58.7
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 8.9e-62 241.5 234 51.7
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.5e-61 240.7 242 54.1
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 8.3e-60 235.0 218 56.0
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 2.4e-59 233.4 231 52.4
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 3.2e-59 233.0 283 46.6
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.6e-55 220.7 191 56.0
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 3.6e-55 219.5 200 52.5
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.4e-54 217.6 192 55.7
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 6.8e-54 215.3 203 50.2
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 4.9e-52 209.1 207 46.9
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.9e-51 207.2 202 52.0
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 9.2e-51 204.9 141 70.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 2.3e-49 200.3 199 49.2
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.0e-49 199.1 110 86.4
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 6.6e-49 198.7 184 55.4
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 4.3e-48 196.1 141 67.4
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.8e-47 193.4 185 49.2
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 3.6e-47 193.0 204 48.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 6.2e-47 192.2 273 39.2
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.7e-42 176.8 151 65.6
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 7.1e-35 152.1 161 54.0
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 4.3e-32 142.9 204 36.8
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.4e-30 137.9 146 45.2
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 3.8e-28 129.8 166 40.4
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 3.8e-28 129.8 105 58.1
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 3.9e-25 119.8 89 59.6
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 6.2e-23 112.5 104 58.7
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 8.4e-20 102.1 208 35.6
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 4.2e-19 99.8 225 31.1
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 2.5e-16 90.5 78 52.6
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 5.4e-11 72.8 78 42.3
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 2.3e-09 67.4 57 54.4
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 5.6e-08 62.8 48 58.3
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 4.8e-07 59.7 41 58.5


User provided reference genes

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