Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16061 Avicennia marina HOM05D002691 ORTHO05D087930 4.0e-60 234.6 118 100.0
Cc09_g00220 Coffea canephora HOM05D002691 ORTHO05D003304 3.1e-12 75.5 45 80.0
SGA_v2.0_scaffold7G03678 Striga asiatica HOM05D002691 ORTHO05D003304 1.2e-11 73.6 50 72.0
SalBow8G3570 Salvia bowleyana HOM05D002691 ORTHO05D003304 1.3e-10 70.1 45 75.6
MSTRG.7119 Avicennia marina HOM05D002691 ORTHO05D003304 1.7e-10 69.7 45 77.8
Oeu031384.1 Olea europaea HOM05D002691 ORTHO05D003304 1.7e-10 69.7 45 77.8
SalBow8G5166 Salvia bowleyana HOM05D002691 ORTHO05D003304 1.7e-10 69.7 45 75.6
Dinv04391 Davidia involucrata HOM05D002176 ORTHO05D002598 1.1e-09 67.0 45 68.9
Oeu044437.1 Olea europaea HOM05D002691 ORTHO05D003304 1.9e-09 66.2 46 76.1
TAR627G1201 Trochodendron aralioides HOM05D002691 ORTHO05D003304 1.9e-09 66.2 45 71.1
TAR624G0565 Trochodendron aralioides HOM05D002691 ORTHO05D003304 4.2e-09 65.1 45 71.1
Migut.O00739 Erythranthe guttata HOM05D002691 ORTHO05D003304 2.1e-08 62.8 45 68.9
TAR629G2924 Trochodendron aralioides HOM05D002691 ORTHO05D003304 3.5e-08 62.0 45 66.7
SGA_v2.0_scaffold186G40136 Striga asiatica HOM05D002691 ORTHO05D003304 1.0e-07 60.5 45 64.4
Nn1g07747 Nelumbo nucifera HOM05D002691 ORTHO05D003304 6.7e-07 57.8 45 60.0
Nn1g07574 Nelumbo nucifera HOM05D002691 ORTHO05D003304 8.7e-07 57.4 45 64.4
MD11G1036800 Malus domestica HOM05D002691 ORTHO05D003304 1.5e-06 56.6 36 77.8
PSO541G0817 Papaver somniferum HOM05D002691 ORTHO05D003304 1.9e-06 56.2 46 60.9
PSO675G4903 Papaver somniferum HOM05D002691 ORTHO05D003304 1.9e-06 56.2 46 60.9
Aqoxy7G03879 Aquilegia oxysepala HOM05D002691 ORTHO05D003304 2.5e-06 55.8 48 60.4
Cc05_g15270 Coffea canephora HOM05D002691 ORTHO05D003304 3.3e-06 55.5 37 70.3
MBI15_g38531_MAGBIO Magnolia biondii HOM05D002691 ORTHO05D003304 4.3e-06 55.1 44 56.8
Hund23086 Selenicereus undatus HOM05D002691 ORTHO05D003304 4.3e-06 55.1 37 70.3
Migut.H01742 Erythranthe guttata HOM05D002691 ORTHO05D003304 5.6e-06 54.7 39 66.7
GSVIVG01014738001 Vitis vinifera HOM05D002691 ORTHO05D003304 7.4e-06 54.3 34 76.5
MSTRG.14502 Avicennia marina HOM05D002691 ORTHO05D003304 9.6e-06 53.9 37 67.6
Cfa021887 Carpinus fangiana HOM05D002691 ORTHO05D003304 9.6e-06 53.9 37 70.3
Duzib170G0390 Durio zibethinus HOM05D002691 ORTHO05D003304 9.6e-06 53.9 37 70.3
Gohir.A05G176600 Gossypium hirsutum HOM05D002691 ORTHO05D003304 9.6e-06 53.9 36 72.2
PGSC0003DMG400008690 Solanum tuberosum HOM05D002691 ORTHO05D003304 9.6e-06 53.9 37 67.6


User provided reference genes

Program Settings