Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 2.6e-166 588.6 287 100.0
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 6.1e-147 524.2 287 86.8
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.0e-146 523.5 287 87.1
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.3e-144 516.5 287 85.7
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.1e-143 511.5 287 84.3
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 7.0e-143 510.8 285 84.2
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.6e-142 509.6 287 84.0
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 5.0e-141 504.6 287 82.2
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 8.6e-141 503.8 283 84.8
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 3.6e-139 498.4 287 82.6
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 8.0e-139 497.3 309 79.0
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 3.0e-138 495.4 287 79.1
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 1.5e-137 493.0 287 78.4
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 4.4e-137 491.5 285 79.6
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.7e-137 491.1 287 80.5
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 7.5e-137 490.7 294 79.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 7.5e-137 490.7 287 79.8
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 7.5e-137 490.7 286 79.0
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 2.8e-136 488.8 286 78.7
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.1e-135 486.9 288 79.5
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 1.4e-135 486.5 287 79.1
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 7.0e-135 484.2 284 79.2
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 9.2e-135 483.8 288 78.8
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 7.8e-134 480.7 284 78.5
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 7.8e-134 480.7 287 79.4
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 7.8e-134 480.7 287 78.0
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 2.3e-133 479.2 284 78.2
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 3.8e-133 478.4 284 78.9
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 5.0e-133 478.0 287 77.0
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 6.6e-133 477.6 282 78.7
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.1e-132 476.9 287 78.7
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.1e-132 476.9 287 78.7
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.1e-132 476.9 284 77.8
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.5e-132 476.5 287 78.7
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.5e-132 476.5 284 77.8
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.9e-132 476.1 298 75.2
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 3.3e-132 475.3 287 77.4
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 5.6e-132 474.6 287 77.4
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 9.5e-132 473.8 286 77.6
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.2e-131 473.4 286 77.3
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.6e-131 473.0 287 76.7
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 2.1e-131 472.6 284 76.1
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 2.1e-131 472.6 271 81.9
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.8e-131 472.2 286 77.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.0e-130 470.3 289 76.5
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.4e-130 469.9 284 76.8
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.8e-130 469.5 287 74.2
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 2.3e-130 469.2 286 76.6
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 4.0e-130 468.4 289 76.5
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.2e-129 466.8 284 76.8
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.2e-129 466.8 287 76.3
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.2e-129 466.8 287 78.0
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.5e-129 466.5 286 76.9
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.5e-129 466.5 282 77.7
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 3.4e-129 465.3 286 76.6
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 5.8e-129 464.5 285 76.5
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 7.5e-129 464.2 284 76.4
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.7e-128 463.0 287 73.5
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.2e-128 462.6 285 76.8
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.9e-128 462.2 287 73.9
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 4.9e-128 461.5 285 76.8
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 4.9e-128 461.5 286 77.3
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 4.9e-128 461.5 287 75.6
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 6.4e-128 461.1 283 73.9
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.9e-127 459.5 285 75.8
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 3.2e-127 458.8 289 75.1
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 4.1e-127 458.4 287 74.2
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 7.0e-127 457.6 285 76.1
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 7.0e-127 457.6 283 75.6
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.6e-126 456.4 287 72.1
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 2.7e-126 455.7 281 75.4
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 6.6e-125 451.1 290 73.1
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 1.1e-124 450.3 287 71.4
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 1.1e-124 450.3 325 66.5
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 1.5e-124 449.9 288 72.6
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 5.6e-124 448.0 282 75.2
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 7.3e-124 447.6 286 72.4
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.2e-123 446.8 286 70.6
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 3.6e-123 445.3 273 76.2
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 2.3e-122 442.6 273 76.2
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 2.3e-122 442.6 273 76.2
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 8.9e-122 440.7 286 69.9
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.2e-121 440.3 274 73.7
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 9.8e-121 437.2 288 69.8
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.7e-120 436.4 287 70.7
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 4.1e-119 431.8 286 70.3
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 9.2e-119 430.6 269 73.2
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.1e-114 417.2 281 68.3
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 5.2e-114 414.8 262 72.1
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.6e-113 412.5 268 70.5
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.6e-110 403.3 246 76.4
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 8.6e-109 397.5 280 68.6
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 3.1e-106 389.0 280 66.8
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 3.4e-105 385.6 283 64.0
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 4.9e-104 381.7 238 78.6
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.1e-103 380.6 285 63.5
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.6e-102 376.7 246 69.1
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.1e-99 366.3 213 79.8
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 2.9e-88 329.3 262 59.5
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 4.0e-82 308.9 175 81.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.5e-73 280.4 265 48.3
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 5.8e-73 278.5 261 52.5
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 4.8e-67 258.8 258 48.8
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.2e-65 254.2 262 48.1
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.3e-52 209.5 152 65.1
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.5e-48 194.9 111 83.8
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 7.2e-47 191.8 254 39.0
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 3.6e-46 189.5 304 41.8
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 3.1e-42 176.4 105 75.2
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 5.9e-41 172.2 194 49.0
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 2.7e-38 163.3 166 53.0
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.0e-32 144.8 88 77.3
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 2.2e-32 143.7 94 68.1
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 5.0e-32 142.5 95 66.3
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.4e-29 134.4 77 80.5
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.1e-22 110.5 69 73.9
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 6.1e-22 109.0 72 69.4
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 8.0e-14 82.0 41 82.9
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.3e-07 60.1 48 64.6


User provided reference genes

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