Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.7e-157 559.3 287 100.0
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.1e-116 423.7 288 76.7
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.2e-115 420.2 288 77.4
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 2.8e-115 419.1 290 75.9
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 1.4e-114 416.8 287 76.3
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.7e-109 399.8 291 71.5
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.5e-108 396.7 291 71.1
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.9e-108 396.4 274 72.6
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 4.3e-108 395.2 242 80.2
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.6e-107 392.1 289 72.3
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.8e-106 389.8 251 78.1
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.4e-106 389.4 243 80.2
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 3.1e-106 389.0 242 80.6
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 4.0e-106 388.7 263 74.1
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.6e-105 386.0 287 71.4
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 5.8e-105 384.8 346 63.9
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 1.3e-104 383.6 288 69.4
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.3e-104 383.6 285 70.9
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.2e-104 382.9 295 68.8
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 3.8e-104 382.1 287 71.4
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 4.9e-104 381.7 294 67.7
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 4.9e-104 381.7 289 68.5
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 6.4e-104 381.3 249 76.7
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 6.4e-104 381.3 234 79.5
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 8.4e-104 380.9 254 74.8
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 2.4e-103 379.4 287 69.0
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 4.2e-103 378.6 234 78.6
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 4.2e-103 378.6 296 68.2
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.2e-103 378.6 272 72.1
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 5.4e-103 378.3 291 69.4
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 7.1e-103 377.9 280 69.3
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 7.1e-103 377.9 286 69.2
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 7.1e-103 377.9 293 69.6
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.6e-102 376.7 273 71.4
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.6e-102 376.7 279 69.9
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 2.7e-102 375.9 242 75.2
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.7e-102 375.9 274 70.8
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 2.7e-102 375.9 234 79.1
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 3.5e-102 375.6 247 76.1
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 4.6e-102 375.2 234 78.6
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 7.8e-102 374.4 289 70.9
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 7.8e-102 374.4 216 82.9
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 7.8e-102 374.4 289 68.9
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 1.7e-101 373.2 236 78.4
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 2.3e-101 372.9 289 67.1
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 2.3e-101 372.9 294 66.3
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 3.0e-101 372.5 254 73.2
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 3.0e-101 372.5 240 76.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 3.9e-101 372.1 292 67.5
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 5.1e-101 371.7 234 77.4
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 8.7e-101 370.9 235 77.0
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.5e-100 370.2 323 63.5
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.5e-100 370.2 254 72.8
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.5e-100 370.2 263 71.5
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 1.9e-100 369.8 290 69.3
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.9e-100 369.8 286 67.8
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.9e-100 369.8 235 78.3
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.9e-100 369.8 292 67.5
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.5e-100 369.4 235 77.4
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 3.3e-100 369.0 234 77.4
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 3.3e-100 369.0 280 67.1
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 4.3e-100 368.6 239 77.4
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 4.3e-100 368.6 234 76.9
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 5.6e-100 368.2 234 76.9
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 9.6e-100 367.5 240 75.4
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 9.6e-100 367.5 267 72.7
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 9.6e-100 367.5 278 69.4
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.2e-99 367.1 290 67.2
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.2e-99 367.1 289 69.2
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.6e-99 366.7 250 72.8
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 2.8e-99 365.9 289 68.9
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.6e-99 365.5 289 68.9
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 3.6e-99 365.5 257 70.8
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 4.7e-99 365.2 234 78.6
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 6.2e-99 364.8 277 67.5
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 6.2e-99 364.8 231 76.6
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 8.1e-99 364.4 242 72.7
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.8e-98 363.2 277 67.5
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 5.3e-98 361.7 302 63.2
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.9e-98 361.3 232 76.3
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 9.0e-98 360.9 290 67.9
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.6e-97 359.4 256 71.5
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 5.8e-97 358.2 287 67.6
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 7.6e-97 357.8 290 66.6
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 9.9e-97 357.5 282 66.7
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.2e-96 356.3 286 64.0
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.9e-96 355.1 283 66.8
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 8.4e-96 354.4 274 68.6
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.1e-95 354.0 281 66.2
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-95 353.2 281 66.2
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 3.2e-95 352.4 314 61.1
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.2e-95 352.4 281 65.8
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.3e-93 347.1 267 67.0
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 5.1e-93 345.1 288 62.8
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 1.5e-92 343.6 284 63.7
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 6.2e-91 338.2 233 70.8
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.7e-88 330.1 212 77.4
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 9.3e-87 324.3 262 62.2
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 1.6e-78 297.0 205 67.3
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.7e-77 291.6 193 75.6
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 2.5e-76 289.7 279 58.8
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.8e-75 285.4 298 56.7
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 4.0e-74 282.3 202 64.4
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.0e-72 277.7 219 68.5
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.3e-72 277.3 241 57.3
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.8e-66 256.9 214 64.5
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.0e-64 251.1 217 63.1
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 2.9e-64 249.6 216 58.3
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 5.2e-37 159.1 177 52.0
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 3.4e-36 156.4 279 39.4
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.4e-34 151.0 117 70.1
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 4.1e-34 149.4 95 77.9
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 7.7e-33 145.2 193 43.5
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 2.1e-30 137.1 158 43.0
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 5.2e-29 132.5 94 72.3
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 6.8e-29 132.1 198 40.4
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 4.1e-26 122.9 146 47.3
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 1.2e-09 68.2 113 38.1
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 2.8e-06 57.0 109 32.1


User provided reference genes

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