Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 6.7e-165 583.9 295 100.0
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.8e-51 206.1 301 46.5
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 6.5e-51 205.3 301 46.5
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 9.3e-50 201.4 284 45.8
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 7.4e-47 191.8 295 44.1
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.9e-36 155.6 276 42.4
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 3.8e-35 152.9 305 40.3
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 8.5e-35 151.8 302 39.7
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 1.2e-28 131.3 310 39.7
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.2e-28 131.3 298 37.6
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.0e-28 130.6 298 37.6
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 2.7e-25 120.2 358 33.0
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 2.6e-23 113.6 261 37.5
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 7.0e-21 105.5 160 44.4
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.3e-19 101.3 279 33.3
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.1e-18 98.2 314 31.5
unitig_749.g13658 Utricularia gibba HOM05D020686 ORTHO05D005331 2.5e-18 97.1 267 29.6
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 5.5e-18 95.9 304 33.6
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 5.5e-18 95.9 304 31.2
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 6.1e-17 92.4 320 32.8
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 6.1e-17 92.4 264 31.4
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.0e-16 91.7 293 32.1
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.8e-16 90.9 299 32.1
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.0e-16 89.7 298 30.9
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.0e-16 89.7 298 30.9
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.2e-16 89.4 275 32.0
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 6.8e-16 89.0 338 31.1
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.2e-15 88.2 300 28.7
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.5e-15 87.8 296 29.1
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.0e-15 87.4 262 33.2
unitig_22.g6750 Utricularia gibba HOM05D020686 ORTHO05D005331 2.6e-15 87.0 299 31.4
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.7e-15 85.1 132 47.7
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.7e-15 85.1 186 37.1
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 9.7e-15 85.1 301 29.6
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 2.2e-14 84.0 295 32.5
unitig_26.g9356 Utricularia gibba HOM05D020686 ORTHO05D005331 3.7e-14 83.2 302 29.5
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.3e-14 82.4 250 33.6
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 8.3e-14 82.0 250 33.6
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 3.1e-13 80.1 140 39.3
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.1e-13 80.1 128 44.5
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 4.1e-13 79.7 305 28.2
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 4.1e-13 79.7 318 28.6
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.1e-13 79.7 131 46.6
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 9.1e-13 78.6 294 28.6
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 1.6e-12 77.8 344 29.4
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.0e-12 77.4 268 31.3
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 2.0e-12 77.4 125 40.8
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-12 77.4 123 43.9
unitig_8.g3362 Utricularia gibba HOM05D020686 ORTHO05D005331 2.0e-12 77.4 264 29.5
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 2.7e-12 77.0 336 31.2
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 4.5e-12 76.3 263 30.4
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.5e-12 76.3 128 43.8
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 5.9e-12 75.9 280 28.9
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 5.9e-12 75.9 351 29.1
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 7.7e-12 75.5 354 26.8
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 1.0e-11 75.1 335 28.7
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.0e-11 75.1 269 29.7
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.0e-11 75.1 315 30.5
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.3e-11 74.7 250 31.2
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 2.2e-11 73.9 212 34.0
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 3.8e-11 73.2 315 29.5
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 6.5e-11 72.4 174 32.2
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.5e-10 71.2 181 37.0
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.9e-10 70.9 128 43.8
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 7.2e-10 68.9 270 28.9
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 7.2e-10 68.9 298 28.5
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 9.4e-10 68.6 331 29.9
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 1.6e-09 67.8 302 29.1
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 2.1e-09 67.4 159 34.0
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 3.6e-09 66.6 292 27.4
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 3.6e-09 66.6 327 26.6
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 4.7e-09 66.2 287 31.7
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 4.7e-09 66.2 354 23.7
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 6.1e-09 65.9 311 30.5
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 6.1e-09 65.9 261 29.9
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 6.1e-09 65.9 84 45.2
SGA_v2.0_scaffold112G31666 Striga asiatica HOM05D007160 ORTHO05D005331 6.1e-09 65.9 285 28.1
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 8.0e-09 65.5 300 28.0
Rhsim13G0180200 Rhododendron simsii HOM05D007160 ORTHO05D005331 1.0e-08 65.1 255 29.8
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 1.4e-08 64.7 276 26.4
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.4e-08 64.7 286 28.0
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.4e-08 64.7 376 24.7
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 1.4e-08 64.7 301 27.6
Sc06g0009300 Simmondsia chinensis HOM05D025247 ORTHO05D026483 3.0e-08 63.5 321 29.0
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 4.0e-08 63.2 185 34.1
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.2e-08 62.8 74 50.0
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.8e-08 62.4 74 48.6
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 6.8e-08 62.4 337 28.8
unitig_744.g24538 Utricularia gibba HOM05D020686 ORTHO05D005331 8.8e-08 62.0 61 54.1
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.2e-07 61.6 87 43.7
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.2e-07 61.6 87 43.7
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 2.6e-07 60.5 374 26.2
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 4.4e-07 59.7 99 43.4
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.4e-07 59.7 160 35.6
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 4.4e-07 59.7 249 28.9
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 7.5e-07 58.9 323 28.5
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 7.5e-07 58.9 87 42.5
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 7.5e-07 58.9 87 42.5
unitig_21.g20214 Utricularia gibba HOM05D020686 ORTHO05D005331 9.8e-07 58.5 272 29.0
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 1.3e-06 58.2 298 26.2
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 2.2e-06 57.4 257 29.2
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 2.8e-06 57.0 336 26.5
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 2.8e-06 57.0 94 44.7
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 3.7e-06 56.6 290 25.9
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 3.7e-06 56.6 105 41.0
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 3.7e-06 56.6 303 26.4
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 3.7e-06 56.6 256 28.1
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 3.7e-06 56.6 274 29.6
PSO210G1528 Papaver somniferum HOM05D025247 ORTHO05D050219 8.3e-06 55.5 298 24.8


User provided reference genes

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