Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15840 Avicennia marina HOM05D009288 ORTHO05D011444 1.9e-217 758.8 375 100.0
MSTRG.7368 Avicennia marina HOM05D009288 ORTHO05D011444 2.2e-144 516.2 387 70.3
Migut.M01095 Erythranthe guttata HOM05D009288 ORTHO05D011444 4.1e-119 432.2 393 61.6
Migut.H01464 Erythranthe guttata HOM05D009288 ORTHO05D011444 2.0e-113 413.3 375 60.8
Oeu001096.1 Olea europaea HOM05D009288 ORTHO05D011444 8.3e-112 407.9 389 59.6
SGA_v2.0_scaffold309G48159 Striga asiatica HOM05D009288 ORTHO05D011444 1.6e-110 403.7 387 58.1
Oeu012164.1 Olea europaea HOM05D009288 ORTHO05D011444 2.1e-110 403.3 400 59.2
Peaxi162Scf00697g00054 Petunia axillaris HOM05D009288 ORTHO05D011444 1.9e-108 396.7 448 52.9
Nitab4.5_0005016g0020 Nicotiana tabacum HOM05D009288 ORTHO05D000173 4.3e-108 395.6 436 52.8
PGSC0003DMG400031772 Solanum tuberosum HOM05D009288 ORTHO05D011444 1.4e-106 390.6 429 52.7
Sopen02g022400 Solanum pennellii HOM05D009288 ORTHO05D011444 5.2e-106 388.7 424 52.8
SalBow8G2277 Salvia bowleyana HOM05D009288 ORTHO05D011444 2.9e-104 382.9 392 53.8
CAN.G79.87 Capsicum annuum HOM05D009288 ORTHO05D011444 4.6e-102 375.6 434 51.4
SGA_v2.0_scaffold16G07649 Striga asiatica HOM05D009288 ORTHO05D011444 2.5e-100 369.8 391 54.5
Cc02_g14100 Coffea canephora HOM05D009288 ORTHO05D011444 3.3e-100 369.4 408 51.5
Nitab4.5_0002114g0180 Nicotiana tabacum HOM05D009288 ORTHO05D011444 3.1e-98 362.8 437 49.7
PGSC0003DMG400022835 Solanum tuberosum HOM05D009288 ORTHO05D011444 5.3e-98 362.1 427 51.1
Nitab4.5_0005043g0050 Nicotiana tabacum HOM05D009288 ORTHO05D011444 3.4e-97 359.4 436 49.3
Solyc10g008920.1 Solanum lycopersicum HOM05D009288 ORTHO05D011444 1.1e-95 354.4 435 49.9
Peaxi162Scf00490g00074 Petunia axillaris HOM05D009288 ORTHO05D011444 2.4e-95 353.2 433 48.3
Sopen10g004710 Solanum pennellii HOM05D009288 ORTHO05D011444 7.1e-95 351.7 435 49.4
DCAR_028039 Daucus carota HOM05D009288 ORTHO05D011444 2.6e-89 333.2 378 49.7
DCAR_004037 Daucus carota HOM05D009288 ORTHO05D011444 4.5e-89 332.4 371 49.6
CAN.G1876.1 Capsicum annuum HOM05D009288 ORTHO05D011444 3.5e-86 322.8 434 46.3
SalBow7G2427 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.0e-85 321.2 371 50.9
Nitab4.5_0008221g0030 Nicotiana tabacum HOM05D000288 ORTHO05D011444 1.5e-84 317.4 427 46.4
SalBow7G0267 Salvia bowleyana HOM05D009288 ORTHO05D011444 9.6e-84 314.7 371 49.6
vmacro03898 Vaccinium macrocarpon HOM05D000288 ORTHO05D011444 9.0e-82 308.1 371 46.6
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 4.2e-79 299.3 245 60.0
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 4.2e-79 299.3 371 47.2
CSS0036897 Camellia sinensis var. sinensis HOM05D009288 ORTHO05D011444 2.1e-78 297.0 371 46.4
Solyc02g077490.3 Solanum lycopersicum HOM05D009288 ORTHO05D011444 4.5e-73 279.3 168 75.0
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 1.0e-72 278.1 197 67.0
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 6.5e-72 275.4 381 45.7
Hma1.2p1_1465F.1_g285290 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 5.2e-45 186.0 188 52.1
Actinidia05663 Actinidia chinensis HOM05D000288 ORTHO05D000173 1.7e-19 101.3 74 62.2
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 1.9e-15 87.8 187 30.5
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 7.5e-12 75.9 190 28.4
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 6.4e-11 72.8 149 32.2
COL.COLO4_12936 Corchorus olitorius HOM05D008582 ORTHO05D010200 1.2e-09 68.6 110 37.3
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 1.6e-09 68.2 148 29.1
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 2.7e-09 67.4 190 30.0
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 2.7e-09 67.4 157 34.4
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 4.6e-09 66.6 162 30.2
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 7.8e-09 65.9 173 30.1
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 2.3e-08 64.3 154 31.2
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 2.3e-08 64.3 207 27.1
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 3.3e-07 60.5 157 33.1
Lj3g0008510 Lotus japonicus HOM05D000886 ORTHO05D000525 4.3e-07 60.1 111 30.6
Gohir.A11G245100 Gossypium hirsutum HOM05D000886 ORTHO05D000525 5.6e-07 59.7 109 36.7
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 9.5e-07 58.9 156 28.2
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 9.5e-07 58.9 112 32.1


User provided reference genes

Program Settings