Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 3.0e-55 218.4 118 100.0
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 1.6e-45 186.0 118 83.1
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 5.2e-44 181.0 120 83.3
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 2.4e-41 172.2 118 78.8
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 7.1e-41 170.6 117 77.8
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 1.6e-40 169.5 118 78.0
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 1.0e-39 166.8 122 75.4
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 1.7e-39 166.0 117 76.9
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 3.9e-39 164.9 117 75.2
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 5.1e-39 164.5 121 74.4
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 5.1e-39 164.5 117 74.4
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 5.1e-39 164.5 122 75.4
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 6.6e-39 164.1 118 73.7
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 8.6e-39 163.7 121 74.4
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 8.6e-39 163.7 121 74.4
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 8.6e-39 163.7 118 75.4
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 1.1e-38 163.3 117 76.1
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 1.5e-38 162.9 118 75.4
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 3.3e-38 161.8 127 71.7
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 5.6e-38 161.0 127 72.4
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 7.3e-38 160.6 125 71.2
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.2e-37 159.8 117 74.4
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.2e-37 159.8 118 72.0
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 2.1e-37 159.1 121 73.6
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 2.1e-37 159.1 125 71.2
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 2.1e-37 159.1 117 72.6
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 2.8e-37 158.7 117 74.4
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 2.8e-37 158.7 117 73.5
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 2.8e-37 158.7 118 73.7
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 3.6e-37 158.3 118 72.0
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 6.2e-37 157.5 116 74.1
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 6.2e-37 157.5 118 71.2
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 8.1e-37 157.1 118 71.2
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 1.1e-36 156.8 117 73.5
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 1.8e-36 156.0 117 71.8
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.8e-36 156.0 117 72.6
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 2.3e-36 155.6 120 72.5
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 3.1e-36 155.2 120 71.7
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.1e-36 155.2 117 70.9
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 3.1e-36 155.2 118 70.3
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 3.1e-36 155.2 116 73.3
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 3.1e-36 155.2 106 73.6
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 3.1e-36 155.2 120 70.8
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 4.0e-36 154.8 117 70.9
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 8.9e-36 153.7 117 72.6
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 8.9e-36 153.7 121 71.9
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 1.5e-35 152.9 117 71.8
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 1.5e-35 152.9 117 70.9
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 2.0e-35 152.5 117 72.6
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.0e-35 152.5 117 70.9
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 2.6e-35 152.1 119 70.6
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 3.4e-35 151.8 117 70.9
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.8e-35 151.0 117 70.1
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.8e-35 151.0 117 70.1
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.3e-34 149.8 122 69.7
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.3e-34 149.8 117 68.4
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.3e-34 149.8 117 68.4
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 1.7e-34 149.4 118 68.6
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 1.7e-34 149.4 118 68.6
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 1.7e-34 149.4 118 68.6
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 1.7e-34 149.4 118 68.6
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.7e-34 149.4 111 73.0
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.7e-34 149.4 117 67.5
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.7e-34 149.4 117 67.5
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.2e-34 149.1 117 67.5
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 2.2e-34 149.1 117 67.5
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 2.2e-34 149.1 117 70.9
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 3.8e-34 148.3 101 74.3
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.8e-34 148.3 117 66.7
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 3.8e-34 148.3 117 68.4
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 3.8e-34 148.3 117 68.4
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 4.9e-34 147.9 118 70.3
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 4.9e-34 147.9 118 70.3
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 6.4e-34 147.5 117 70.1
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 6.4e-34 147.5 120 68.3
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 8.4e-34 147.1 115 71.3
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 8.4e-34 147.1 111 71.2
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 8.4e-34 147.1 120 70.8
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 8.4e-34 147.1 120 70.8
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 8.4e-34 147.1 110 69.1
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.1e-33 146.7 123 67.5
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 1.9e-33 146.0 118 69.5
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 1.9e-33 146.0 114 70.2
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 2.4e-33 145.6 107 72.9
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 2.4e-33 145.6 117 65.8
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 3.2e-33 145.2 120 69.2
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 7.1e-33 144.1 119 68.9
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 7.1e-33 144.1 151 57.6
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 9.2e-33 143.7 117 70.1
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 9.2e-33 143.7 117 66.7
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 1.2e-32 143.3 118 67.8
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 2.1e-32 142.5 118 66.9
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 2.7e-32 142.1 126 65.9
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 2.7e-32 142.1 126 65.9
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 3.5e-32 141.7 122 67.2
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 4.6e-32 141.4 109 66.1
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 1.0e-31 140.2 117 67.5
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 1.0e-31 140.2 116 65.5
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 2.3e-31 139.0 117 65.8
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 6.6e-31 137.5 111 63.1
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 1.5e-30 136.3 117 66.7
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 1.9e-30 136.0 96 70.8
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 2.1e-29 132.5 117 64.1
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 2.1e-29 132.5 114 64.9
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 3.6e-29 131.7 96 68.8
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 1.3e-26 123.2 79 74.7
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 1.0e-23 113.6 97 59.8
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 5.1e-23 111.3 111 55.0
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 6.6e-23 110.9 69 75.4
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 6.6e-23 110.9 69 75.4
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 3.3e-22 108.6 71 70.4
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 3.1e-20 102.1 72 70.8
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 6.9e-20 100.9 94 54.3
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 5.8e-19 97.8 280 31.4
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.4e-18 94.4 77 67.5
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 2.1e-16 89.4 71 62.0
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.3e-15 86.7 76 65.8
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 8.7e-15 84.0 84 59.5
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 3.3e-14 82.0 70 55.7
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.4e-12 76.6 55 70.9
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 1.8e-12 76.3 106 45.3
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 4.0e-12 75.1 47 83.0
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 6.9e-12 74.3 48 79.2
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.0e-11 72.8 42 81.0
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 4.5e-11 71.6 42 78.6
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.9e-09 66.2 42 76.2
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 2.4e-09 65.9 41 78.0
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 1.5e-06 56.6 98 33.7


User provided reference genes

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