Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 4.4e-244 847.4 402 100.0
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 1.5e-228 795.8 409 92.4
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 3.5e-225 784.6 403 92.6
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 3.6e-222 774.6 414 89.4
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 3.4e-220 768.1 403 90.3
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.3e-219 766.1 403 91.1
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 8.4e-219 763.5 418 86.4
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 8.4e-219 763.5 400 90.0
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 3.2e-218 761.5 401 89.3
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 4.2e-218 761.1 401 88.8
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 5.4e-218 760.8 403 89.1
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 1.6e-217 759.2 401 88.5
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.6e-217 759.2 401 88.3
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 1.3e-216 756.1 414 87.7
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 1.3e-216 756.1 402 88.1
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 3.9e-216 754.6 402 88.1
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 6.6e-216 753.8 401 88.0
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 8.7e-216 753.4 391 90.8
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 3.3e-215 751.5 402 86.8
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 4.3e-215 751.1 402 89.1
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 7.4e-215 750.4 401 87.5
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 1.6e-214 749.2 401 89.0
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 3.6e-214 748.0 403 88.1
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.6e-214 748.0 402 87.6
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.8e-213 745.7 400 88.5
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.8e-213 745.7 404 87.1
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 3.1e-213 745.0 390 90.3
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 5.3e-213 744.2 402 88.1
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 6.9e-213 743.8 399 86.7
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 9.0e-213 743.4 402 87.8
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 9.0e-213 743.4 402 87.8
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 9.0e-213 743.4 402 86.8
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.2e-212 743.0 402 86.3
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 2.0e-212 742.3 402 88.3
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 2.6e-212 741.9 404 86.6
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 2.6e-212 741.9 404 86.4
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 7.6e-212 740.3 390 88.5
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 1.7e-211 739.2 402 86.3
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.9e-211 738.4 410 85.9
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 3.8e-211 738.0 404 85.6
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 4.9e-211 737.6 405 86.4
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 6.4e-211 737.3 402 86.8
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 6.4e-211 737.3 404 85.9
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.1e-210 736.5 389 88.7
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 1.4e-210 736.1 404 86.4
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 1.9e-210 735.7 396 88.1
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 1.9e-210 735.7 404 85.4
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 2.4e-210 735.3 401 85.3
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 2.4e-210 735.3 401 86.3
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 2.4e-210 735.3 401 86.5
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 3.2e-210 734.9 402 85.8
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 3.2e-210 734.9 402 85.8
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.2e-209 733.0 403 86.4
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 2.1e-209 732.3 401 84.8
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 3.5e-209 731.5 401 86.8
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 6.0e-209 730.7 404 85.9
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 7.9e-209 730.3 395 87.1
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 7.9e-209 730.3 401 84.5
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 1.0e-208 729.9 402 84.8
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 5.1e-208 727.6 409 84.4
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.1e-207 726.5 402 85.6
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.9e-207 725.7 402 85.8
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.5e-207 725.3 396 85.9
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 3.3e-207 724.9 402 85.1
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 2.8e-206 721.8 402 82.3
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 6.2e-206 720.7 391 86.2
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 3.1e-205 718.4 390 87.7
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 4.0e-205 718.0 433 80.4
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.2e-204 716.5 402 82.3
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.2e-204 716.5 402 82.1
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.5e-204 716.1 402 85.3
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 2.0e-204 715.7 402 83.1
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 5.8e-204 714.1 402 81.8
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.7e-203 712.6 402 84.8
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 2.9e-203 711.8 385 87.5
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 4.9e-203 711.1 402 82.3
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 8.4e-203 710.3 413 82.8
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 3.2e-202 708.4 399 83.7
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 3.2e-202 708.4 432 78.7
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 1.3e-200 703.0 402 81.3
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.3e-200 702.2 402 82.6
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 3.0e-200 701.8 402 81.1
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 5.7e-199 697.6 400 83.2
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 7.4e-199 697.2 400 82.0
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 2.8e-198 695.3 405 82.2
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.6e-196 688.7 396 82.1
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 7.6e-196 687.2 386 81.6
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 7.6e-196 687.2 386 81.6
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 4.2e-194 681.4 402 78.4
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 5.5e-194 681.0 402 81.3
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 1.6e-193 679.5 388 80.9
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 3.5e-193 678.3 419 78.8
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 2.3e-192 675.6 357 87.7
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.3e-191 671.8 386 81.6
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 2.8e-190 668.7 364 85.7
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 9.0e-189 663.7 409 76.5
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 7.7e-188 660.6 379 82.1
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 3.2e-186 655.2 387 78.8
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 3.2e-186 655.2 410 78.5
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 4.2e-186 654.8 387 78.8
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 1.0e-184 650.2 387 78.0
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 4.3e-183 644.8 399 77.4
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 2.2e-182 642.5 341 87.4
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 4.8e-182 641.3 375 79.2
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 5.3e-181 637.9 402 78.6
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 5.9e-180 634.4 403 77.2
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 2.0e-172 609.4 356 79.2
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 7.7e-172 607.4 326 86.2
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.8e-171 605.1 395 70.9
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.3e-166 590.1 396 69.7
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 3.7e-166 588.6 395 72.7
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 3.7e-166 588.6 394 69.5
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 4.8e-166 588.2 398 69.8
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.2e-164 583.6 305 90.2
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 3.8e-163 578.6 306 89.5
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.3e-155 553.5 306 86.3
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 5.2e-152 541.6 345 73.9
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 3.7e-150 535.4 400 64.5
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 5.6e-146 521.5 394 62.7
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 9.9e-119 431.0 242 84.3
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 4.3e-106 389.0 266 67.3
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 7.3e-106 388.3 207 88.4
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 3.2e-93 346.3 371 54.2
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 4.6e-92 342.4 186 83.9
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 4.9e-86 322.4 218 74.3
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 8.4e-86 321.6 171 86.5
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 1.2e-84 317.8 159 91.2
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 4.5e-79 299.3 225 63.1
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 7.2e-77 292.0 433 39.0
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.0e-70 271.6 146 85.6
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 1.8e-59 234.2 144 76.4
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 2.0e-58 230.7 175 64.0
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 2.9e-46 190.3 192 53.6
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 4.5e-31 139.8 72 88.9
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 8.0e-20 102.4 204 38.2
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 1.6e-12 78.2 273 27.1
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 2.4e-08 64.3 54 59.3


User provided reference genes

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