Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15713 Avicennia marina HOM05D005812 ORTHO05D007232 2.3e-97 359.0 191 100.0
MSTRG.3778 Avicennia marina HOM05D005812 ORTHO05D007232 1.4e-54 216.9 198 63.1
Migut.L00124 Erythranthe guttata HOM05D005812 ORTHO05D007232 4.5e-53 211.8 203 62.1
MSTRG.2569 Avicennia marina HOM05D005812 ORTHO05D007232 9.6e-48 194.1 196 53.6
MSTRG.23345 Avicennia marina HOM05D005812 ORTHO05D007232 1.6e-47 193.4 199 53.8
Oeu051807.1 Olea europaea HOM05D005812 ORTHO05D007232 7.2e-43 177.9 155 63.2
SalBow5G0456 Salvia bowleyana HOM05D005812 ORTHO05D007232 2.1e-42 176.4 215 49.8
Cc07_g15160 Coffea canephora HOM05D005812 ORTHO05D007232 2.8e-39 166.0 206 51.5
Actinidia06567 Actinidia chinensis HOM05D005812 ORTHO05D007232 1.1e-38 164.1 193 49.7
Actinidia20016 Actinidia chinensis HOM05D005812 ORTHO05D007232 5.3e-38 161.8 193 48.2
Dinv21904 Davidia involucrata HOM05D005812 ORTHO05D007232 9.1e-38 161.0 195 48.7
Nitab4.5_0000083g0250 Nicotiana tabacum HOM05D005812 ORTHO05D007232 2.9e-36 156.0 203 50.7
Actinidia28235 Actinidia chinensis HOM05D005812 ORTHO05D007232 3.2e-35 152.5 193 48.2
Nitab4.5_0004651g0010 Nicotiana tabacum HOM05D005812 ORTHO05D007232 5.5e-35 151.8 203 49.3
Peaxi162Scf00212g00413 Petunia axillaris HOM05D005812 ORTHO05D007232 5.5e-35 151.8 203 49.3
GSVIVG01002272001 Vitis vinifera HOM05D005812 ORTHO05D007232 5.5e-35 151.8 196 45.9
Dinv13192 Davidia involucrata HOM05D005812 ORTHO05D007232 1.6e-34 150.2 169 49.1
Oeu001791.1 Olea europaea HOM05D005812 ORTHO05D007232 3.9e-33 145.6 136 60.3
Nitab4.5_0000897g0060 Nicotiana tabacum HOM05D005812 ORTHO05D007232 5.7e-32 141.7 179 46.4
TAR628G0897 Trochodendron aralioides HOM05D005812 ORTHO05D007232 3.7e-31 139.0 193 42.5
unitig_88.g27721 Utricularia gibba HOM05D005812 ORTHO05D007232 6.3e-31 138.3 193 48.2
Solyc04g055250.4 Solanum lycopersicum HOM05D005812 ORTHO05D007232 1.1e-30 137.5 199 44.7
Hma1.2p1_1428F.1_g282935 Hydrangea macrophylla HOM05D005812 ORTHO05D007232 4.1e-30 135.6 199 42.7
SalBow5G2541 Salvia bowleyana HOM05D005812 ORTHO05D007232 4.1e-30 135.6 154 54.5
CAN.G18.15 Capsicum annuum HOM05D005812 ORTHO05D007232 5.3e-30 135.2 156 52.6
Sopen04g025100 Solanum pennellii HOM05D005812 ORTHO05D007232 9.1e-30 134.4 199 44.7
CAN.G18.16 Capsicum annuum HOM05D005812 ORTHO05D007232 1.2e-29 134.0 156 52.6
Peaxi162Scf00611g00015 Petunia axillaris HOM05D005812 ORTHO05D007232 2.6e-29 132.9 156 50.6
Rhsim08G0010800 Rhododendron simsii HOM05D005812 ORTHO05D007232 4.5e-29 132.1 197 43.7
ECA232G1467 Erigeron canadensis HOM05D005812 ORTHO05D007232 7.7e-29 131.3 195 44.6
PGR102G1433 Punica granatum HOM05D005812 ORTHO05D007232 1.7e-28 130.2 190 38.4
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 2.2e-28 129.8 195 43.6
Lsat_1_v5_gn_4_141220 Lactuca sativa HOM05D005812 ORTHO05D007232 1.1e-27 127.5 197 43.7
Cfa002656 Carpinus fangiana HOM05D005812 ORTHO05D007232 7.2e-27 124.8 202 41.1
QL06p049491 Quercus lobata HOM05D005812 ORTHO05D007232 9.4e-27 124.4 194 39.2
CiPaw.04G099800 Carya illinoinensis HOM05D005812 ORTHO05D007232 4.7e-26 122.1 198 39.9
Potri.007G093200 Populus trichocarpa HOM05D005812 ORTHO05D007232 4.7e-26 122.1 193 38.9
DCAR_014222 Daucus carota HOM05D005812 ORTHO05D007232 1.8e-25 120.2 194 39.7
Thecc.01G101100 Theobroma cacao HOM05D005812 ORTHO05D007232 1.8e-25 120.2 192 39.6
Aqoxy6G00789 Aquilegia oxysepala HOM05D005812 ORTHO05D007232 5.2e-25 118.6 200 39.5
MBI02_g31269_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 5.2e-25 118.6 194 37.1
vmacro12958 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 6.7e-25 118.2 162 41.4
Duzib147G1550 Durio zibethinus HOM05D005812 ORTHO05D007232 3.3e-24 115.9 192 38.5
Duzib264G1072 Durio zibethinus HOM05D005812 ORTHO05D007232 3.3e-24 115.9 187 40.1
Prupe.6G187400 Prunus persica HOM05D005812 ORTHO05D007232 7.4e-24 114.8 192 37.0
Duzib187G0152 Durio zibethinus HOM05D005812 ORTHO05D007232 9.7e-24 114.4 189 39.7
CiPaw.03G142200 Carya illinoinensis HOM05D005812 ORTHO05D007232 1.7e-23 113.6 195 37.4
Nn5g30114 Nelumbo nucifera HOM05D005812 ORTHO05D007232 1.7e-23 113.6 191 38.2
DCAR_010089 Daucus carota HOM05D005812 ORTHO05D007232 2.2e-23 113.2 151 42.4
HanXRQChr10g0305381 Helianthus annuus HOM05D005812 ORTHO05D007232 3.7e-23 112.5 188 36.7
Gohir.D11G221400 Gossypium hirsutum HOM05D005812 ORTHO05D007232 4.8e-23 112.1 189 38.1
Gorai.007G238400 Gossypium raimondii HOM05D005812 ORTHO05D007232 4.8e-23 112.1 189 38.1
Eucgr.H04782 Eucalyptus grandis HOM05D005812 ORTHO05D007232 6.3e-23 111.7 188 35.6
Gohir.A11G201100 Gossypium hirsutum HOM05D005812 ORTHO05D007232 8.2e-23 111.3 225 36.0
HanXRQChr05g0145211 Helianthus annuus HOM05D005812 ORTHO05D007232 1.1e-22 110.9 147 42.9
MD15G1323600 Malus domestica HOM05D005812 ORTHO05D007232 3.1e-22 109.4 193 36.8
ECA232G0795 Erigeron canadensis HOM05D005812 ORTHO05D007232 5.3e-22 108.6 190 39.5
Nn1g05352 Nelumbo nucifera HOM05D003496 ORTHO05D003909 7.0e-22 108.2 184 38.6
Ca_16522_v3 Cicer arietinum L. HOM05D005812 ORTHO05D007232 1.6e-21 107.1 188 37.8
unitig_32.g11811 Utricularia gibba HOM05D005812 ORTHO05D007232 2.6e-21 106.3 185 42.7
AUR62002005 Chenopodium quinoa HOM05D005812 ORTHO05D007232 3.5e-21 105.9 194 35.1
Atru.chr4.60 Acer truncatum HOM05D005812 ORTHO05D007232 1.0e-20 104.4 186 36.0
Gorai.008G090000 Gossypium raimondii HOM05D005812 ORTHO05D007232 1.0e-20 104.4 171 39.2
Hund16289 Selenicereus undatus HOM05D005812 ORTHO05D007232 1.0e-20 104.4 189 37.0
TPR.G17850 Trifolium pratense HOM05D005812 ORTHO05D007232 1.7e-20 103.6 188 36.7
PGSC0003DMG400001876 Solanum tuberosum HOM05D005812 ORTHO05D007232 2.9e-20 102.8 130 46.9
HanXRQChr09g0254761 Helianthus annuus HOM05D005812 ORTHO05D007232 3.8e-20 102.4 194 39.2
Ciclev10026269m.g Citrus clementina HOM05D005812 ORTHO05D007232 8.5e-20 101.3 186 36.0
Cpa.g.sc230.1 Carica papaya HOM05D005812 ORTHO05D007232 1.5e-19 100.5 183 35.5
AUR62003797 Chenopodium quinoa HOM05D005812 ORTHO05D007232 1.5e-19 100.5 150 40.0
Gohir.A12G083366 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.5e-19 100.5 170 37.6
CANSAT01G0800 Cannabis sativa HOM05D005812 ORTHO05D007232 1.9e-19 100.1 192 36.5
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea HOM05D005812 ORTHO05D007232 3.2e-19 99.4 188 37.2
ClCG10G008980 Citrullus lanatus HOM05D005812 ORTHO05D007232 4.2e-19 99.0 155 40.0
Glyma.11G240400 Glycine max HOM05D005812 ORTHO05D007232 4.2e-19 99.0 192 37.0
Medtr3g087150 Medicago truncatula HOM05D005812 ORTHO05D007232 5.5e-19 98.6 188 35.1
Psat5g090240 Pisum sativum HOM05D005812 ORTHO05D007232 5.5e-19 98.6 185 36.8
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea HOM05D005812 ORTHO05D007232 1.6e-18 97.1 188 36.2
RcHm_v2.0_Chr2g0113441 Rosa chinensis HOM05D005812 ORTHO05D007232 1.6e-18 97.1 149 39.6
Manes.13G075600 Manihot esculenta HOM05D005812 ORTHO05D007232 6.1e-18 95.1 129 40.3
Glyma.18G016900 Glycine max HOM05D005812 ORTHO05D007232 1.0e-17 94.4 192 37.0
VMungo1383G2465 Vigna mungo HOM05D005812 ORTHO05D007232 1.0e-17 94.4 192 35.4
FvH4_1g20820 Fragaria vesca HOM05D005812 ORTHO05D007232 2.3e-17 93.2 182 34.6
Gohir.A10G085300 Gossypium hirsutum HOM05D005812 ORTHO05D007232 3.0e-17 92.8 178 35.4
Phvul.001G252300 Phaseolus vulgaris HOM05D005812 ORTHO05D007232 3.0e-17 92.8 192 35.4
Sed0017830 Sechium edule HOM05D005812 ORTHO05D007232 3.0e-17 92.8 155 38.7
Gorai.011G113200 Gossypium raimondii HOM05D005812 ORTHO05D007232 4.0e-17 92.4 178 34.8
Lj2C549G6 Lonicera japonica HOM05D005812 ORTHO05D007232 5.2e-17 92.0 100 54.0
SGA_v2.0_scaffold47G17788 Striga asiatica HOM05D005812 ORTHO05D007232 1.5e-16 90.5 103 47.6
EL10Ac6g15110 Beta vulgaris HOM05D005812 ORTHO05D007232 2.0e-16 90.1 181 32.0
Lalb_Chr23g0277481 Lupinus albus HOM05D005812 ORTHO05D007232 2.0e-16 90.1 196 33.7
AT4G39900 Arabidopsis thaliana HOM05D005812 ORTHO05D007232 2.6e-16 89.7 185 36.8
Ah.02g122540 Amaranthus hybridus HOM05D005812 ORTHO05D007232 4.4e-16 89.0 192 32.3
Haze_24926 Corylus avellana HOM05D005812 ORTHO05D007232 4.4e-16 89.0 171 36.8
THA.LOC104807691 Tarenaya hassleriana HOM05D005812 ORTHO05D007232 9.7e-16 87.8 177 36.2
Gohir.D10G103600 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.3e-15 87.4 178 34.3
Lj6g0021205 Lotus japonicus HOM05D005812 ORTHO05D007232 1.3e-15 87.4 182 34.6
Sp7g35990 Schrenkiella parvula HOM05D005812 ORTHO05D007232 1.3e-15 87.4 185 36.2
PSO541G0090 Papaver somniferum HOM05D005812 ORTHO05D007232 2.8e-15 86.3 191 33.5
PSO781G0022 Papaver somniferum HOM05D005812 ORTHO05D007232 4.8e-15 85.5 189 32.8
CsaV3_4G008880 Cucumis sativus L. HOM05D005812 ORTHO05D007232 6.3e-15 85.1 154 38.3
BraA08t34281Z Brassica rapa HOM05D005812 ORTHO05D007232 8.2e-15 84.7 179 38.5
Manes.12G134500 Manihot esculenta HOM05D005812 ORTHO05D007232 1.1e-14 84.3 165 32.7
A08p23250 Brassica napus HOM05D005812 ORTHO05D007232 1.4e-14 84.0 179 37.4
Thhalv10026058m.g Eutrema salsugineum HOM05D005812 ORTHO05D007232 1.4e-14 84.0 185 35.1
BcaB03g12290 Brassica carinata HOM05D005812 ORTHO05D007232 1.8e-14 83.6 181 35.9
BcaNung06391 Brassica carinata HOM05D005812 ORTHO05D007232 1.8e-14 83.6 184 34.8
BolC3t20101H Brassica oleracea HOM05D005812 ORTHO05D007232 1.8e-14 83.6 179 36.9
Carub.0007s0184 Capsella rubella HOM05D005812 ORTHO05D007232 1.8e-14 83.6 181 35.4
BcaC01g00328 Brassica carinata HOM05D005812 ORTHO05D007232 2.4e-14 83.2 179 36.9
C03p78490 Brassica napus HOM05D005812 ORTHO05D007232 2.4e-14 83.2 179 37.4
AL7G12150 Arabidopsis lyrata HOM05D005812 ORTHO05D007232 7.0e-14 81.6 181 35.4
A01p00790 Brassica napus HOM05D005812 ORTHO05D007232 5.9e-13 78.6 184 33.7
BraA01t00082Z Brassica rapa HOM05D005812 ORTHO05D007232 5.9e-13 78.6 184 33.7
BcaNung00911 Brassica carinata HOM05D005812 ORTHO05D007232 2.9e-12 76.3 186 32.3
C01p00910 Brassica napus HOM05D005812 ORTHO05D007232 2.9e-12 76.3 188 33.0
MELO3C018959.2 Cucumis melo HOM05D005812 ORTHO05D007232 2.9e-12 76.3 98 45.9
CARHR246800 Cardamine hirsuta HOM05D005812 ORTHO05D007232 3.8e-12 75.9 181 33.7
Oeu056609.1 Olea europaea HOM05D005812 ORTHO05D007232 5.0e-12 75.5 48 75.0
BcaNung00793 Brassica carinata HOM05D005812 ORTHO05D007232 1.2e-10 70.9 143 37.1
Sc03g0002070 Simmondsia chinensis HOM05D005812 ORTHO05D007232 8.0e-10 68.2 168 28.6
Gohir.D12G083200 Gossypium hirsutum HOM05D005812 ORTHO05D007232 7.5e-08 61.6 87 37.9
Rhsim10G0163100 Rhododendron simsii HOM05D001481 ORTHO05D001865 1.3e-07 60.8 103 34.0
HanXRQChr09g0255041 Helianthus annuus HOM05D005812 ORTHO05D007232 2.8e-07 59.7 97 41.2
TWI74G1407 Tripterygium wilfordii HOM05D005812 ORTHO05D007232 4.8e-07 58.9 124 31.5
Oeu026089.1 Olea europaea HOM05D005812 ORTHO05D007232 8.3e-07 58.2 61 47.5
Ah.03g143620 Amaranthus hybridus HOM05D005812 ORTHO05D007232 1.4e-06 57.4 169 27.2


User provided reference genes

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