Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 8.6e-61 236.9 127 100.0
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 2.3e-37 159.1 127 66.9
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 2.8e-35 152.1 127 62.2
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 9.0e-34 147.1 122 65.6
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.2e-33 146.7 126 61.9
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 5.8e-33 144.4 126 60.3
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 2.2e-32 142.5 121 64.5
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 2.9e-32 142.1 127 59.1
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 2.9e-32 142.1 125 61.6
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 3.8e-32 141.7 127 59.1
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 3.8e-32 141.7 127 59.1
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 3.8e-32 141.7 127 59.1
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 3.8e-32 141.7 125 60.8
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 4.9e-32 141.4 126 60.3
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 6.4e-32 141.0 127 57.5
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 8.4e-32 140.6 126 58.7
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 1.1e-31 140.2 122 63.1
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.4e-31 139.8 125 62.4
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.4e-31 139.8 126 61.1
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 1.9e-31 139.4 125 60.8
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.9e-31 139.4 123 61.8
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 1.9e-31 139.4 125 62.4
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 3.2e-31 138.7 125 60.0
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 3.2e-31 138.7 126 61.1
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 4.2e-31 138.3 125 62.4
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 5.5e-31 137.9 125 60.0
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 5.5e-31 137.9 125 60.0
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 5.5e-31 137.9 125 60.0
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 5.5e-31 137.9 124 61.3
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 5.5e-31 137.9 125 62.4
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 5.5e-31 137.9 126 61.1
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 5.5e-31 137.9 127 57.5
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 7.1e-31 137.5 125 62.4
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 9.3e-31 137.1 127 60.6
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 1.2e-30 136.7 125 58.4
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 1.2e-30 136.7 127 58.3
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 1.6e-30 136.3 125 57.6
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.6e-30 136.3 124 60.5
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.6e-30 136.3 125 61.6
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 2.1e-30 136.0 122 60.7
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 2.7e-30 135.6 124 57.3
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 2.7e-30 135.6 125 59.2
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 3.5e-30 135.2 125 56.8
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 6.0e-30 134.4 121 60.3
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 7.9e-30 134.0 125 60.0
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 3.0e-29 132.1 122 61.5
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 3.9e-29 131.7 121 59.5
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 5.1e-29 131.3 121 58.7
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.1e-28 130.2 126 59.5
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 2.5e-28 129.0 125 57.6
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 3.3e-28 128.6 123 57.7
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 4.3e-28 128.3 123 56.9
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 5.6e-28 127.9 136 53.7
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 6.9e-26 120.9 127 52.8
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 8.4e-24 114.0 101 61.4
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 1.9e-23 112.8 121 53.7
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 5.5e-23 111.3 98 58.2
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 1.1e-20 103.6 121 47.9
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 6.3e-19 97.8 121 47.1
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 8.2e-19 97.4 87 63.2
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 2.4e-18 95.9 80 62.5
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 2.2e-16 89.4 81 63.0
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 3.2e-15 85.5 118 41.5
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 2.7e-14 82.4 134 39.6
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 5.1e-13 78.2 72 55.6
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 5.9e-09 64.7 107 39.3
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 6.1e-06 54.7 47 59.6


User provided reference genes

Program Settings