Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 5.0e-243 844.0 412 100.0
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 3.8e-182 641.7 381 80.3
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.9e-170 602.8 382 74.1
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.1e-169 599.4 397 73.8
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.4e-168 596.7 397 73.3
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.3e-166 590.1 382 72.0
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 3.0e-163 578.9 382 70.9
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 8.7e-163 577.4 371 70.6
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 8.7e-163 577.4 380 71.8
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 3.3e-162 575.5 391 69.1
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.3e-161 573.5 408 69.1
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 4.8e-161 571.6 407 67.3
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 8.2e-161 570.9 393 70.5
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 1.2e-159 567.0 381 69.0
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 2.9e-158 562.4 397 67.0
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 2.9e-158 562.4 399 66.7
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 3.2e-157 558.9 402 66.2
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 4.2e-157 558.5 397 66.2
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 5.5e-157 558.1 390 66.2
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 2.7e-156 555.8 384 67.2
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.5e-154 550.1 398 65.8
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.3e-153 547.0 416 64.7
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 6.3e-153 544.7 400 64.5
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 4.1e-152 542.0 384 66.9
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 9.1e-152 540.8 413 63.0
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.6e-151 539.3 396 65.2
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 4.5e-151 538.5 379 66.5
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 7.7e-151 537.7 398 64.6
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.8e-150 535.4 379 65.4
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 6.5e-150 534.6 380 64.5
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 1.1e-149 533.9 391 63.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 5.5e-149 531.6 403 62.3
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 4.7e-148 528.5 383 63.2
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.0e-147 527.3 407 60.7
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.8e-147 526.6 403 62.0
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 3.9e-147 525.4 407 61.9
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 3.9e-147 525.4 387 64.3
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.1e-146 523.9 407 60.2
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 4.4e-146 521.9 409 61.4
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 5.7e-146 521.5 401 63.1
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.3e-145 520.4 404 60.9
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.7e-145 520.0 403 61.8
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.2e-145 519.6 402 63.7
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 2.8e-145 519.2 419 60.6
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.1e-144 517.3 400 62.0
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 3.1e-144 515.8 371 65.2
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 9.1e-144 514.2 401 62.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.5e-143 513.5 399 60.9
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 4.5e-143 511.9 415 59.3
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.0e-142 510.8 403 61.0
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.7e-142 510.0 409 61.6
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 8.5e-142 507.7 384 61.2
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.2e-140 503.8 399 60.9
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.7e-140 502.7 404 60.9
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 3.6e-140 502.3 406 59.6
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 3.6e-140 502.3 394 60.4
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.5e-138 496.9 402 58.7
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.6e-138 496.1 387 62.0
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 3.7e-137 492.3 286 79.0
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 4.8e-137 491.9 406 60.6
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 4.8e-137 491.9 406 60.6
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.1e-136 490.7 406 60.6
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 1.4e-136 490.3 388 60.6
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.8e-136 490.0 401 60.1
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.4e-136 489.6 383 62.1
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 4.1e-136 488.8 438 55.9
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 5.3e-136 488.4 398 58.0
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 5.3e-136 488.4 383 61.1
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.6e-135 486.9 399 60.7
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 6.5e-134 481.5 335 65.7
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 2.5e-133 479.6 386 61.4
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 4.2e-133 478.8 443 55.8
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 7.5e-130 468.0 371 58.5
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 2.8e-129 466.1 401 58.6
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 6.3e-129 464.9 303 69.6
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.3e-129 464.5 398 57.3
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 3.1e-128 462.6 380 57.4
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 2.9e-126 456.1 369 63.1
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.1e-120 437.6 309 64.1
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.0e-118 428.7 295 65.1
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 2.5e-117 426.4 389 53.5
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 2.8e-116 422.9 289 66.1
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.0e-115 419.1 400 51.8
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.2e-114 417.5 376 53.7
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 1.6e-111 407.1 303 61.1
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.5e-109 400.6 311 58.8
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.1e-104 384.4 296 58.4
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.5e-93 347.4 292 61.6
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.6e-90 336.7 231 66.7
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 1.8e-83 313.9 273 55.3
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 5.8e-82 308.9 274 58.0
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.2e-80 303.1 253 57.7
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 1.6e-79 300.8 233 60.9
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 6.0e-79 298.9 389 43.2
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 1.4e-75 287.7 217 62.7
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 5.6e-69 265.8 387 38.0
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.3e-62 244.6 201 56.7
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.5e-58 231.1 158 67.1
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.0e-54 218.4 181 58.0
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.0e-46 190.3 145 65.5
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 8.7e-46 188.7 435 30.1
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.4e-43 181.4 148 58.1
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 7.9e-39 165.6 135 54.1
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.4e-29 132.5 105 65.7
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 6.5e-25 119.4 408 25.7
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 1.2e-23 115.2 78 67.9
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 8.0e-23 112.5 353 27.8
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 2.0e-21 107.8 197 34.5
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 2.6e-21 107.5 83 61.4
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 4.1e-19 100.1 410 25.6
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.6e-18 98.2 68 64.7
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 8.5e-17 92.4 389 25.4
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 2.5e-16 90.9 75 60.0
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.0e-13 81.3 114 39.5
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 3.4e-13 80.5 72 44.4
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 2.8e-12 77.4 80 57.5
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.2e-10 72.0 68 51.5
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 8.0e-07 59.3 69 46.4


User provided reference genes

Program Settings