Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 5.3e-284 980.3 488 100.0
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 3.5e-179 632.1 489 66.7
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 1.8e-178 629.8 495 67.3
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 4.8e-176 621.7 490 68.0
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 1.5e-174 616.7 492 64.8
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 3.9e-162 575.5 494 61.3
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.5e-158 563.5 490 61.6
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 2.6e-158 562.8 494 59.5
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 3.4e-158 562.4 494 59.3
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 1.2e-155 553.9 496 59.5
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 4.7e-155 552.0 495 57.8
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 1.4e-154 550.4 493 57.8
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 2.3e-154 549.7 493 57.2
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 2.4e-151 539.7 494 58.1
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.1e-148 530.8 489 58.7
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.9e-148 530.0 529 53.1
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.9e-148 530.0 471 59.7
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 7.2e-148 528.1 490 55.5
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 9.4e-148 527.7 494 56.3
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 9.4e-148 527.7 491 55.2
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.2e-147 527.3 491 57.2
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.6e-147 526.9 491 57.8
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.1e-147 526.6 491 58.2
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 3.6e-147 525.8 506 56.1
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 8.0e-147 524.6 504 55.8
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.8e-146 523.5 493 57.0
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 9.7e-145 517.7 498 55.8
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 6.3e-144 515.0 494 54.9
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 6.3e-144 515.0 490 56.1
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.1e-143 514.2 493 55.2
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 1.8e-143 513.5 494 54.9
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.1e-143 512.7 494 55.3
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 5.3e-143 511.9 496 54.6
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.6e-142 510.4 495 54.9
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.0e-142 510.0 490 54.5
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 3.5e-142 509.2 494 54.7
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 7.7e-142 508.1 488 54.9
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 7.7e-142 508.1 490 56.1
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.8e-141 505.8 499 54.9
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 5.0e-141 505.4 500 56.6
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.1e-140 504.2 495 53.9
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 1.9e-140 503.4 495 53.5
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 5.5e-140 501.9 494 55.1
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.6e-139 500.4 498 54.2
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.1e-139 500.0 498 54.0
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 2.1e-139 500.0 504 52.6
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 6.1e-139 498.4 492 52.8
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 2.3e-138 496.5 489 54.2
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 4.0e-138 495.7 497 53.9
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 5.2e-138 495.4 493 54.2
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 1.5e-137 493.8 493 55.2
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.5e-137 493.8 497 52.9
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 2.0e-137 493.4 496 52.4
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 2.0e-137 493.4 501 53.7
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 2.6e-137 493.0 493 55.0
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 3.7e-136 489.2 495 53.1
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.4e-135 487.3 495 53.3
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.6e-134 483.8 488 53.7
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.0e-133 481.1 496 53.2
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 2.2e-133 479.9 492 50.6
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.9e-133 479.6 494 52.0
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 3.8e-133 479.2 523 52.2
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 5.0e-133 478.8 495 52.7
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 1.5e-132 477.2 489 51.3
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 4.2e-132 475.7 496 51.8
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 3.6e-131 472.6 510 49.6
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 8.0e-131 471.5 496 52.6
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.7e-129 465.3 442 55.7
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 1.7e-128 463.8 495 51.5
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 2.8e-128 463.0 495 51.3
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 3.7e-128 462.6 497 52.7
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 8.3e-128 461.5 499 51.5
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 1.1e-127 461.1 394 59.4
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 1.6e-126 457.2 494 50.4
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 2.0e-126 456.8 500 50.8
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.7e-125 453.8 552 46.6
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 3.8e-125 452.6 495 50.1
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 5.0e-125 452.2 495 50.1
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 6.6e-125 451.8 495 50.1
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.1e-124 451.1 492 50.6
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 2.5e-124 449.9 496 50.0
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 3.3e-124 449.5 503 49.7
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 3.3e-124 449.5 495 50.1
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 4.0e-122 442.6 497 50.3
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.5e-121 440.7 491 49.3
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 4.4e-121 439.1 494 48.2
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 1.4e-119 434.1 490 48.4
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.8e-119 433.7 441 51.9
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 2.3e-117 426.8 490 48.0
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.0e-114 417.9 501 46.5
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 8.9e-114 414.8 489 48.3
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 1.4e-111 407.5 484 46.9
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 2.4e-111 406.8 497 47.5
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 7.0e-111 405.2 492 47.0
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.1e-108 397.9 515 46.2
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 2.5e-108 396.7 478 45.6
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 4.0e-106 389.4 400 50.2
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.2e-88 330.5 453 45.9
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 3.1e-74 283.5 556 35.6
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 3.1e-74 283.5 420 39.8
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 4.0e-74 283.1 418 38.0
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 2.0e-73 280.8 464 36.9
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 1.2e-54 218.4 191 60.7
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 3.6e-54 216.9 325 38.5
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.4e-50 204.1 204 52.5
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.2e-43 181.0 198 53.5
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 2.6e-41 174.1 561 27.3
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 3.6e-30 137.1 582 23.4
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 4.5e-25 120.2 120 54.2
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 2.9e-24 117.5 397 26.7
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 1.5e-23 115.2 367 29.4
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.4e-12 77.0 113 37.2
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 5.7e-12 76.6 66 60.6
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 1.5e-07 62.0 69 50.7
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 1.6e-06 58.5 214 22.9


User provided reference genes

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