Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 8.8e-146 520.4 287 100.0
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 2.3e-85 319.7 245 69.0
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.4e-66 257.3 248 58.5
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.1e-60 237.7 246 57.3
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 4.5e-57 225.7 246 52.4
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 5.0e-56 222.2 251 51.8
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.1e-55 221.1 254 51.2
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 2.5e-55 219.9 247 51.0
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 2.5e-55 219.9 247 51.0
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 3.6e-54 216.1 251 51.8
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.7e-54 215.7 242 54.5
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 1.8e-53 213.8 229 53.7
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 6.7e-53 211.8 248 51.2
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 6.7e-53 211.8 237 57.8
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 8.8e-53 211.5 289 52.2
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 1.4e-50 204.1 229 52.4
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.5e-49 200.7 243 45.7
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.9e-49 198.7 238 53.8
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 7.7e-49 198.4 238 46.6
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.3e-48 197.6 254 47.2
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.7e-48 197.2 286 46.5
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 2.9e-48 196.4 231 48.5
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.9e-48 196.4 256 51.2
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 2.9e-48 196.4 230 50.0
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 3.8e-48 196.1 248 49.2
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 5.0e-48 195.7 250 47.6
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 1.4e-47 194.1 243 51.4
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 1.9e-47 193.7 256 48.8
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 2.5e-47 193.4 251 45.4
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 4.2e-47 192.6 246 46.7
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 2.7e-46 189.9 203 50.7
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 4.7e-46 189.1 213 49.3
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 8.0e-46 188.3 248 47.6
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.0e-45 188.0 237 47.7
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.4e-45 187.6 244 48.8
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 1.8e-45 187.2 244 47.1
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 5.2e-45 185.7 233 52.4
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 5.2e-45 185.7 234 51.3
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 8.8e-45 184.9 233 51.5
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.5e-44 184.1 229 46.3
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.6e-44 183.3 198 50.0
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 3.3e-44 183.0 236 54.7
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 4.4e-44 182.6 248 48.0
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 9.7e-44 181.4 246 45.5
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 2.2e-43 180.3 253 45.1
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.8e-43 179.9 256 44.1
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 2.8e-43 179.9 228 47.8
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.8e-43 179.9 226 50.0
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 4.8e-43 179.1 210 46.2
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 4.8e-43 179.1 242 47.5
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 8.2e-43 178.3 203 51.2
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 8.2e-43 178.3 247 44.9
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 2.4e-42 176.8 251 48.2
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 2.4e-42 176.8 226 49.6
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 7.0e-42 175.3 249 45.8
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 2.6e-41 173.3 233 44.6
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 2.6e-41 173.3 230 45.2
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 2.6e-41 173.3 226 45.6
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 4.5e-41 172.6 199 51.3
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.0e-40 171.4 234 46.2
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.0e-40 171.4 260 41.5
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 3.8e-40 169.5 202 51.5
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 5.0e-40 169.1 248 42.3
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 3.2e-39 166.4 253 43.5
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 4.2e-39 166.0 248 43.5
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 2.1e-38 163.7 209 48.3
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 2.7e-38 163.3 269 42.0
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 3.6e-38 162.9 234 44.9
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 4.7e-38 162.5 243 43.6
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 6.1e-38 162.2 226 49.1
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 8.0e-38 161.8 201 48.3
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 1.4e-37 161.0 208 45.2
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.4e-37 161.0 253 44.3
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.8e-37 160.6 253 46.2
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 2.3e-37 160.2 207 44.9
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 6.8e-37 158.7 246 41.5
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.2e-36 157.9 205 46.3
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.3e-35 154.5 268 38.8
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.7e-35 154.1 179 50.3
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 4.8e-35 152.5 196 45.4
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.4e-34 150.2 196 44.9
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 3.1e-34 149.8 168 49.4
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 9.1e-34 148.3 188 45.7
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 1.2e-33 147.9 170 49.4
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 1.6e-33 147.5 206 44.2
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 5.9e-33 145.6 204 44.1
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 7.7e-33 145.2 173 48.0
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.0e-32 144.8 171 48.0
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.0e-32 144.8 194 44.8
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 1.3e-32 144.4 181 47.5
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.7e-32 144.1 262 38.2
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 8.5e-32 141.7 208 44.7
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 1.1e-31 141.4 206 45.1
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 3.2e-31 139.8 170 49.4
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 3.2e-31 139.8 171 47.4
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 5.5e-31 139.0 208 44.2
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 7.2e-31 138.7 175 48.6
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 9.4e-31 138.3 164 48.8
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 3.6e-30 136.3 236 39.8
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 4.7e-30 136.0 155 48.4
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.8e-29 134.0 138 52.2
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 3.0e-29 133.3 145 51.0
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 4.0e-29 132.9 198 41.4
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 1.2e-28 131.3 197 42.6
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 1.5e-28 131.0 134 50.7
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.0e-28 130.6 171 57.9
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 3.4e-28 129.8 216 40.3
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 4.4e-28 129.4 248 39.5
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.2e-27 127.1 247 38.5
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 3.3e-23 113.2 144 44.4
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 1.6e-22 110.9 255 32.9
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.5e-20 104.4 128 41.4
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 4.4e-20 102.8 238 42.4
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 1.7e-19 100.9 154 40.9
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 2.8e-19 100.1 88 54.5
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 1.1e-18 98.2 114 45.6
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 1.8e-18 97.4 144 41.0
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 1.6e-17 94.4 148 39.2
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 2.0e-17 94.0 111 53.2
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 5.9e-17 92.4 103 49.5
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 3.3e-15 86.7 122 45.1
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.6e-14 84.3 63 66.7
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 4.0e-13 79.7 63 60.3


User provided reference genes

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