Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 3.5e-163 578.2 285 100.0
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 1.5e-100 370.2 260 70.8
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 1.9e-100 369.8 292 65.8
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 7.3e-100 367.9 260 70.0
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 3.1e-98 362.5 264 68.9
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 2.0e-97 359.8 274 66.8
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 4.4e-97 358.6 259 69.9
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 2.9e-96 355.9 261 69.0
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 9.2e-95 350.9 260 66.9
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 1.2e-94 350.5 264 67.4
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 6.6e-93 344.7 263 66.9
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 1.5e-92 343.6 241 71.4
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 4.3e-92 342.0 260 66.2
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 1.4e-90 337.0 261 66.3
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 3.4e-89 332.4 260 64.6
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 4.4e-89 332.0 266 63.5
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 4.4e-89 332.0 261 64.0
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 9.9e-89 330.9 268 63.4
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 9.9e-89 330.9 263 65.0
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 3.7e-88 328.9 260 61.9
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 4.9e-88 328.6 260 63.1
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 3.2e-87 325.9 268 62.7
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 3.2e-87 325.9 269 62.8
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 5.4e-87 325.1 260 63.8
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 9.2e-87 324.3 260 63.5
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 9.2e-87 324.3 260 61.2
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 1.2e-86 323.9 261 64.8
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 2.1e-86 323.2 261 61.3
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 3.5e-86 322.4 260 63.1
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 4.6e-86 322.0 261 62.1
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 1.3e-85 320.5 274 59.9
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 1.7e-85 320.1 260 62.3
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 2.3e-85 319.7 275 61.5
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 3.9e-85 318.9 260 61.2
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 8.6e-85 317.8 261 61.7
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 1.1e-84 317.4 267 62.5
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 1.1e-84 317.4 260 61.2
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 1.1e-84 317.4 260 61.2
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 1.1e-84 317.4 260 61.5
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 1.5e-84 317.0 263 61.2
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 1.5e-84 317.0 262 62.6
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 4.3e-84 315.5 281 58.7
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 4.3e-84 315.5 260 63.1
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 9.5e-84 314.3 262 61.1
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 1.6e-83 313.5 267 59.9
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 2.1e-83 313.2 274 59.1
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 4.7e-83 312.0 255 63.5
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 5.2e-82 308.5 260 59.2
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 5.2e-82 308.5 260 60.4
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 8.9e-82 307.8 280 57.9
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 1.2e-81 307.4 262 61.5
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 3.4e-81 305.8 269 60.2
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 4.4e-81 305.4 260 60.8
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 7.6e-81 304.7 266 59.8
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 9.9e-81 304.3 264 58.7
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 9.9e-81 304.3 264 58.0
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 1.3e-80 303.9 269 58.7
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 2.2e-80 303.1 267 58.1
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 2.2e-80 303.1 266 60.5
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 2.9e-80 302.8 263 58.9
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 2.9e-80 302.8 264 58.3
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 6.4e-80 301.6 264 58.3
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 1.1e-79 300.8 276 56.2
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 2.4e-79 299.7 263 59.3
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.4e-79 299.7 264 57.6
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 3.2e-79 299.3 264 58.0
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 4.6e-78 295.4 265 57.7
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 1.0e-77 294.3 263 59.3
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 5.1e-77 292.0 275 54.2
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 6.6e-77 291.6 268 55.6
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 1.1e-76 290.8 286 54.2
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 1.1e-76 290.8 289 52.9
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 8.1e-75 284.6 269 55.0
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 9.0e-74 281.2 269 55.0
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 9.0e-74 281.2 269 55.0
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 9.0e-74 281.2 269 55.0
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 3.4e-73 279.3 269 53.5
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 3.4e-73 279.3 269 53.5
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 5.8e-73 278.5 276 54.3
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 1.1e-71 274.2 276 51.1
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 7.1e-71 271.6 317 47.6
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 2.1e-70 270.0 287 50.5
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 3.3e-68 262.7 353 45.0
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 1.6e-67 260.4 207 64.3
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 3.8e-64 249.2 240 54.6
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 1.1e-63 247.7 259 52.1
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.1e-63 247.7 228 58.3
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 1.9e-63 246.9 230 55.7
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 5.1e-61 238.8 254 51.2
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 8.7e-61 238.0 147 77.6
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 2.5e-60 236.5 247 50.2
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 2.5e-60 236.5 207 62.3
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 4.3e-60 235.7 307 44.6
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 4.8e-51 205.7 143 68.5
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 2.4e-50 203.4 276 43.1
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 3.4e-49 199.5 266 43.6
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 3.2e-47 193.0 115 77.4
SEGI_09534 Sequoiadendron giganteum HOM05D005847 ORTHO05D007143 3.5e-46 189.5 183 53.6
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 8.7e-45 184.9 396 35.1
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 1.7e-40 170.6 326 36.2
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 3.2e-39 166.4 104 74.0
CDE04G2319 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 1.6e-38 164.1 191 45.5
Cpa.g.c33268 Carica papaya HOM05D005847 ORTHO05D007143 1.5e-36 157.5 149 57.7
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 2.6e-33 146.7 126 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 2.1e-30 137.1 155 47.7
Cpa.g.sc15.22 Carica papaya HOM05D005847 ORTHO05D007143 2.8e-27 126.7 82 72.0
AUR62019891 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.5e-25 120.9 118 57.6
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 2.6e-25 120.2 157 49.0
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 5.5e-23 112.5 114 49.1
Atru.chr1.1468 Acer truncatum HOM05D005847 ORTHO05D007143 6.1e-22 109.0 94 55.3
SHI06935 Sapria himalayana HOM05D005847 ORTHO05D007143 8.0e-22 108.6 227 35.7
Nn1g00325 Nelumbo nucifera HOM05D005847 ORTHO05D007143 2.2e-16 90.5 104 51.9
MCO09G139 Micromonas commoda HOM05D005847 ORTHO05D007143 5.0e-16 89.4 280 29.3
Medtr8g040720 Medicago truncatula HOM05D005847 ORTHO05D007143 1.5e-12 77.8 53 56.6
Cre05.g237600 Chlamydomonas reinhardtii HOM05D005847 ORTHO05D007143 7.5e-12 75.5 126 37.3
RcHm_v2.0_Chr7g0205571 Rosa chinensis HOM05D005847 ORTHO05D007143 1.3e-11 74.7 88 46.6
SMO116G0437 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 5.0e-08 62.8 122 31.1
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 9.4e-07 58.5 29 89.7
CBR_g978 Chara braunii HOM05D005847 ORTHO05D007143 2.1e-06 57.4 174 29.3


User provided reference genes

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