Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.9e-59 232.3 112 100.0
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 2.9e-52 208.4 112 86.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 3.7e-47 191.4 115 82.6
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 3.4e-45 184.9 106 86.8
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 4.5e-45 184.5 116 78.4
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 7.6e-45 183.7 114 78.9
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 2.9e-44 181.8 112 78.6
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 6.5e-44 180.6 97 86.6
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 6.5e-44 180.6 97 86.6
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 8.5e-44 180.3 114 77.2
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 8.5e-44 180.3 97 85.6
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 1.4e-43 179.5 101 84.2
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.4e-43 179.5 98 83.7
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.9e-43 179.1 98 87.8
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 2.5e-43 178.7 98 88.8
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 3.2e-43 178.3 114 77.2
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 4.2e-43 177.9 110 80.9
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 5.5e-43 177.6 98 86.7
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 7.2e-43 177.2 97 86.6
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 9.3e-43 176.8 122 73.0
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 9.3e-43 176.8 122 73.0
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 9.3e-43 176.8 98 86.7
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.6e-42 176.0 108 75.9
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.6e-42 176.0 97 85.6
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 1.6e-42 176.0 114 77.2
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 2.1e-42 175.6 98 81.6
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.1e-42 175.6 112 77.7
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 2.1e-42 175.6 112 77.7
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 4.6e-42 174.5 109 73.4
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 6.1e-42 174.1 99 83.8
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 6.1e-42 174.1 108 75.0
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 7.9e-42 173.7 112 76.8
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.0e-41 173.3 98 84.7
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.0e-41 173.3 97 85.6
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 1.3e-41 172.9 98 82.7
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.3e-41 172.9 99 87.9
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.8e-41 172.6 97 86.6
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 3.0e-41 171.8 99 85.9
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 3.0e-41 171.8 99 85.9
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 3.0e-41 171.8 112 74.1
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 3.9e-41 171.4 101 83.2
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 5.1e-41 171.0 109 78.0
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 8.7e-41 170.2 98 84.7
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 1.1e-40 169.9 114 72.8
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 1.5e-40 169.5 107 75.7
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.5e-40 169.5 111 75.7
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.9e-40 169.1 114 71.1
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 1.9e-40 169.1 115 75.7
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.3e-40 167.9 117 68.4
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 4.3e-40 167.9 109 74.3
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 4.3e-40 167.9 97 83.5
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 5.7e-40 167.5 115 74.8
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 7.4e-40 167.2 110 72.7
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 9.7e-40 166.8 100 77.0
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.7e-39 166.0 99 78.8
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.2e-39 165.6 99 78.8
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 2.8e-39 165.2 112 73.2
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 4.8e-39 164.5 112 70.5
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 4.8e-39 164.5 101 77.2
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 4.8e-39 164.5 101 79.2
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.8e-39 164.5 101 79.2
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.8e-39 164.5 101 79.2
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.8e-39 164.5 101 79.2
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 4.8e-39 164.5 99 77.8
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 6.3e-39 164.1 98 78.6
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 6.3e-39 164.1 98 81.6
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.1e-38 163.3 101 77.2
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 6.9e-38 160.6 110 75.5
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.9e-38 160.6 98 79.6
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 6.9e-38 160.6 113 70.8
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.5e-37 159.5 94 78.7
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 2.6e-37 158.7 112 71.4
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 2.6e-37 158.7 117 65.0
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 4.5e-37 157.9 111 69.4
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 4.5e-37 157.9 98 75.5
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 5.9e-37 157.5 82 87.8
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 1.0e-36 156.8 111 66.7
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 1.7e-36 156.0 98 74.5
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.1e-35 153.3 120 62.5
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.5e-35 152.1 110 68.2
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 4.2e-35 151.4 102 71.6
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 4.2e-35 151.4 102 71.6
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 4.2e-35 151.4 102 71.6
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 4.2e-35 151.4 102 71.6
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 4.2e-35 151.4 102 71.6
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 5.5e-35 151.0 81 86.4
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.1e-32 143.3 100 68.0
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 4.5e-29 131.3 103 60.2
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 3.8e-28 128.3 102 57.8
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.1e-27 126.7 126 57.9
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 5.5e-27 124.4 92 65.2
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 8.0e-26 120.6 92 55.4
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.0e-25 120.2 92 68.5
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 8.8e-25 117.1 94 59.6
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 1.7e-23 112.8 97 52.6
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.4e-22 109.8 64 82.8
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 1.0e-20 103.6 60 81.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.0e-16 89.4 77 49.4
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 3.2e-11 72.0 94 34.0
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.2e-11 72.0 52 59.6


User provided reference genes

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