Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 0.0e+00 1474.5 780 100.0
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 4.5e-253 878.2 781 63.0
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.9e-230 803.1 744 60.8
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 8.4e-207 724.5 725 56.3
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.1e-202 709.9 635 62.8
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 4.9e-199 698.7 735 55.5
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 2.4e-185 653.3 734 50.1
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 7.4e-163 578.6 764 46.3
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 1.0e-159 568.2 785 43.7
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 5.2e-156 555.8 782 43.1
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 8.8e-156 555.1 786 43.6
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 9.1e-153 545.0 737 44.9
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 1.0e-151 541.6 781 43.4
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 1.9e-150 537.3 794 44.7
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.7e-149 533.5 761 44.3
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 6.3e-146 522.3 715 45.3
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 3.6e-141 506.5 800 41.5
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 1.2e-139 501.5 785 40.0
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 9.8e-139 498.4 712 43.4
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 2.4e-137 493.8 777 40.5
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 2.5e-126 457.2 784 39.2
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 3.1e-124 450.3 649 43.0
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 4.9e-122 443.0 767 40.8
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.4e-121 441.4 760 39.2
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 2.4e-121 440.7 663 41.2
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 2.7e-120 437.2 772 38.3
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 4.6e-120 436.4 758 39.2
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 6.6e-119 432.6 746 39.8
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 1.8e-116 424.5 759 38.5
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 5.2e-116 422.9 765 37.8
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 6.8e-116 422.5 753 39.4
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 3.4e-115 420.2 749 40.6
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 8.3e-114 415.6 767 36.2
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.1e-113 415.2 725 38.1
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 2.4e-113 414.1 767 37.3
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 4.1e-113 413.3 769 38.1
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 6.0e-112 409.5 767 37.9
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 1.9e-110 404.4 765 39.2
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.0e-107 394.4 761 37.5
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.4e-107 393.7 732 37.8
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 2.1e-104 384.4 505 45.3
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 1.7e-103 381.3 754 37.8
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.0e-103 380.6 764 36.6
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.1e-102 378.6 759 36.6
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 2.5e-102 377.5 760 36.4
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 9.5e-102 375.6 760 37.0
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 8.9e-100 369.0 777 34.6
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 4.4e-99 366.7 752 34.6
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 1.3e-98 365.2 798 34.6
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 3.3e-94 350.5 754 34.9
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 7.3e-94 349.4 749 34.0
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 4.8e-93 346.7 545 41.7
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 4.4e-91 340.1 786 33.7
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 5.8e-91 339.7 746 33.9
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 2.4e-89 334.3 766 34.9
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 9.3e-89 332.4 779 34.0
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 5.3e-84 316.6 849 33.6
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 6.9e-84 316.2 700 34.1
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 9.0e-84 315.8 663 34.5
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 4.5e-83 313.5 649 34.7
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 3.5e-80 303.9 686 32.8
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 5.1e-79 300.1 699 31.9
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 3.7e-77 293.9 615 34.5
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 1.8e-76 291.6 794 31.4
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 1.8e-76 291.6 797 31.2
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 4.5e-75 287.0 724 31.4
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.7e-74 285.0 790 31.5
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.2e-74 284.6 692 31.2
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.9e-74 284.3 792 30.9
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 1.4e-73 282.0 783 31.9
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 3.2e-73 280.8 755 33.2
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 4.2e-73 280.4 755 33.1
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 5.5e-73 280.0 704 30.5
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 3.5e-72 277.3 648 33.0
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 2.3e-71 274.6 450 42.0
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 1.1e-70 272.3 785 32.0
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 5.7e-70 270.0 594 33.5
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 1.6e-69 268.5 698 32.1
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 2.8e-69 267.7 788 32.2
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 6.2e-69 266.5 747 29.0
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 2.4e-68 264.6 718 30.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.1e-65 255.8 451 39.9
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 3.9e-63 247.3 674 31.2
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 3.4e-59 234.2 728 29.0
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 4.2e-57 227.3 553 34.5
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 1.4e-55 222.2 651 30.7
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 2.3e-55 221.5 737 29.9
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 6.7e-55 219.9 507 32.3
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 1.5e-54 218.8 750 30.3
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 2.0e-54 218.4 506 32.4
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 7.4e-54 216.5 507 32.3
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 1.0e-50 206.1 360 37.2
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 2.9e-50 204.5 723 27.8
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 4.8e-45 187.2 763 24.8
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 1.8e-44 185.3 719 28.1
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.2e-43 182.6 732 26.6
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 4.5e-43 180.6 731 26.5
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.2e-35 156.0 600 27.7
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 2.0e-30 138.7 737 25.0
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 5.4e-28 130.6 422 29.4
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 2.7e-27 128.3 251 31.9
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.0e-23 116.3 268 35.8
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 1.4e-20 105.9 138 46.4
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 7.0e-20 103.6 486 25.1
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 1.3e-18 99.4 120 46.7
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 2.0e-11 75.5 96 41.7
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 4.6e-11 74.3 168 31.5
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 5.0e-10 70.9 529 23.8
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 3.3e-09 68.2 132 35.6


User provided reference genes

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