Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.7e-158 562.0 290 100.0
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.9e-119 433.0 286 78.3
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 2.4e-119 432.6 286 78.3
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 8.1e-115 417.5 288 77.4
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.8e-107 392.5 284 71.1
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 2.2e-104 382.9 287 69.0
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 5.0e-104 381.7 291 68.0
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.1e-103 380.6 289 68.9
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.1e-103 380.6 265 71.3
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 3.2e-103 379.0 268 72.0
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.5e-103 378.3 290 68.6
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 3.6e-102 375.6 286 67.5
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 1.8e-101 373.2 285 67.7
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 5.1e-101 371.7 285 68.8
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 1.1e-100 370.5 285 68.4
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.5e-100 370.2 290 66.6
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 3.3e-100 369.0 267 69.3
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 4.3e-100 368.6 230 79.6
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 4.3e-100 368.6 285 65.6
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 4.3e-100 368.6 294 67.0
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 1.1e-98 364.0 270 67.8
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.1e-98 364.0 288 64.9
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 1.1e-98 364.0 285 67.0
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 3.1e-98 362.5 289 64.7
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 3.1e-98 362.5 274 67.5
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 6.9e-98 361.3 271 67.2
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 9.0e-98 360.9 276 69.2
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 9.0e-98 360.9 276 69.2
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.2e-97 360.5 271 66.4
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 1.2e-97 360.5 278 67.6
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 7.7e-97 357.8 291 64.9
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.3e-96 357.1 263 68.8
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 2.9e-96 355.9 276 68.1
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.9e-96 355.9 230 77.4
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 3.8e-96 355.5 287 64.5
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 3.8e-96 355.5 266 67.3
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 5.0e-96 355.1 282 64.9
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 6.5e-96 354.8 267 65.9
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 8.5e-96 354.4 293 64.5
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.1e-95 354.0 268 64.2
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.9e-95 353.2 236 73.7
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 4.2e-95 352.1 282 65.2
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 4.2e-95 352.1 282 65.2
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 9.4e-95 350.9 284 66.9
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 9.4e-95 350.9 270 65.2
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 1.4e-93 347.1 271 63.8
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 1.4e-93 347.1 267 65.9
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.9e-93 345.5 266 63.2
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 1.1e-92 344.0 266 63.2
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.1e-92 344.0 266 63.2
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.5e-92 343.6 225 74.7
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.5e-92 343.6 225 74.7
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 5.7e-92 341.7 278 64.0
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 9.7e-92 340.9 236 72.9
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 8.2e-91 337.8 289 63.0
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.4e-90 337.0 243 67.9
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 1.4e-90 337.0 242 69.8
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 1.8e-90 336.7 283 61.5
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 3.1e-90 335.9 266 66.5
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.5e-89 333.6 274 60.6
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 4.5e-89 332.0 310 57.1
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 4.5e-89 332.0 250 65.6
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 1.0e-88 330.9 231 71.0
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 1.0e-88 330.9 261 62.1
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 1.3e-88 330.5 223 74.4
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 1.3e-88 330.5 263 64.6
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 1.3e-88 330.5 263 64.6
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 1.3e-88 330.5 263 64.6
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.9e-88 329.3 300 56.3
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 3.8e-88 328.9 263 64.3
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 3.8e-88 328.9 263 64.3
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 1.1e-87 327.4 290 61.0
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 1.1e-87 327.4 279 61.6
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.4e-87 327.0 260 65.8
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 1.4e-87 327.0 253 63.2
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 1.9e-87 326.6 235 68.5
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 2.5e-87 326.2 290 61.4
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 4.2e-87 325.5 268 65.3
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 9.4e-87 324.3 261 65.9
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 9.4e-87 324.3 267 64.8
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 9.4e-87 324.3 260 64.6
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.6e-86 323.6 236 68.2
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 2.1e-86 323.2 234 67.5
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 2.7e-86 322.8 267 63.7
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 2.7e-86 322.8 267 63.3
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 6.1e-86 321.6 267 63.3
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 6.1e-86 321.6 284 58.5
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.4e-85 320.5 232 68.1
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 2.3e-85 319.7 235 68.1
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 2.0e-84 316.6 284 58.1
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.3e-83 313.9 244 63.9
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 2.2e-83 313.2 287 58.2
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 3.7e-83 312.4 230 67.0
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 4.5e-81 305.4 247 65.6
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.0e-80 304.3 281 56.2
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 1.1e-79 300.8 230 65.2
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 6.7e-77 291.6 274 59.5
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 6.5e-72 275.0 266 57.9
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 1.5e-71 273.9 183 71.6
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.7e-65 253.1 239 57.7
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 5.9e-65 251.9 281 51.6
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 8.0e-62 241.5 166 74.1
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 7.5e-60 235.0 235 54.9
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 1.5e-47 194.1 211 47.4
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 5.6e-47 192.2 156 64.1
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 1.6e-46 190.7 128 70.3
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.6e-46 190.7 204 53.4
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 2.2e-43 180.3 197 47.2
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 1.1e-42 177.9 185 54.6
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 1.1e-42 177.9 246 42.7
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.9e-42 177.2 193 46.6
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 2.1e-38 163.7 140 60.7
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.1e-37 161.4 193 45.6
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.1e-37 161.4 133 61.7
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 3.0e-32 143.3 87 71.3
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 3.8e-27 126.3 91 69.2
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 1.9e-23 114.0 91 62.6
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 2.5e-23 113.6 84 69.0
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 6.4e-19 99.0 110 52.7
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.0e-16 91.7 52 80.8
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 9.6e-15 85.1 226 27.4
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 4.8e-14 82.8 51 76.5
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 1.9e-10 70.9 71 50.7
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 1.5e-07 61.2 34 82.4
MCO09G217 Micromonas commoda HOM05D006484 ORTHO05D008002 4.8e-06 56.2 178 27.5


User provided reference genes

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