Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15471 Avicennia marina HOM05D006569 ORTHO05D007515 0.0e+00 1605.9 1251 100.0
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 2.4e-264 916.4 1038 59.2
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 8.3e-249 864.8 1055 56.1
SGA_v2.0_scaffold236G43766 Striga asiatica HOM05D006569 ORTHO05D007515 9.9e-242 841.3 1067 49.3
Oeu010220.1 Olea europaea HOM05D006569 ORTHO05D007515 9.9e-218 761.5 1050 55.4
Dinv33774 Davidia involucrata HOM05D006569 ORTHO05D007515 1.6e-196 691.0 1041 54.6
CSS0028247 Camellia sinensis var. sinensis HOM05D006569 ORTHO05D007515 1.3e-193 681.4 1040 48.2
Cc07_g03540 Coffea canephora HOM05D006569 ORTHO05D007515 1.6e-183 647.9 1010 50.9
TAR371G0591 Trochodendron aralioides HOM05D006569 ORTHO05D007515 9.1e-179 632.1 1012 46.5
Rhsim10G0036300 Rhododendron simsii HOM05D006569 ORTHO05D007515 5.5e-176 622.9 983 44.7
GSVIVG01011442001 Vitis vinifera HOM05D006569 ORTHO05D007515 4.7e-167 593.2 1047 50.4
MD09G1053400 Malus domestica HOM05D006569 ORTHO05D007515 1.0e-166 592.0 999 43.0
FAN05G0252 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.2e-165 588.6 1043 42.3
QL02p053824 Quercus lobata HOM05D006569 ORTHO05D007515 1.2e-165 588.6 1066 51.8
CANSAT64G0455 Cannabis sativa HOM05D006569 ORTHO05D007515 1.8e-158 564.7 1038 42.4
Cpa.g.sc14.98 Carica papaya HOM05D006569 ORTHO05D007515 1.3e-156 558.5 1062 48.7
Lju41C9T14 Lonicera japonica HOM05D006569 ORTHO05D007515 3.5e-154 550.4 765 51.1
Potri.017G086000 Populus trichocarpa HOM05D006569 ORTHO05D007515 1.2e-151 542.0 1060 38.0
Sabra17G0075800 Salix brachista HOM05D006569 ORTHO05D007515 2.3e-150 537.7 1060 36.4
FAN14G1478 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.2e-149 535.4 1039 40.1
FAN09G2200 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.0e-149 534.6 1001 40.5
CsaV3_7G024320 Cucumis sativus L. HOM05D006569 ORTHO05D007515 2.2e-148 531.2 1012 42.5
TWI60G0939 Tripterygium wilfordii HOM05D006569 ORTHO05D007515 2.8e-148 530.8 1058 40.1
Lsat_1_v5_gn_2_89461 Lactuca sativa HOM05D006569 ORTHO05D007515 1.8e-147 528.1 1009 42.1
Solyc02g067200.4 Solanum lycopersicum HOM05D006569 ORTHO05D007515 5.4e-147 526.6 1041 32.6
Atru.chr8.291 Acer truncatum HOM05D006569 ORTHO05D007515 5.0e-145 520.0 913 42.5
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 1.6e-143 515.0 756 38.2
Nitab4.5_0003653g0010 Nicotiana tabacum HOM05D006569 ORTHO05D007515 3.6e-143 513.8 755 38.5
CiPaw.04G004700 Carya illinoinensis HOM05D006569 ORTHO05D007515 8.0e-143 512.7 1045 47.4
PGSC0003DMG400025133 Solanum tuberosum HOM05D006569 ORTHO05D007515 8.0e-143 512.7 756 38.0
Manes.01G092900 Manihot esculenta HOM05D006569 ORTHO05D007515 1.2e-141 508.8 1063 38.2
Nitab4.5_0000212g0030 Nicotiana tabacum HOM05D006569 ORTHO05D007515 2.6e-141 507.7 755 40.9
arahy.Tifrunner.gnm1.ann1.80L4ZA Arachis hypogaea HOM05D006569 ORTHO05D007515 7.5e-141 506.1 1033 36.0
Lalb_Chr15g0081471 Lupinus albus HOM05D006569 ORTHO05D007515 4.1e-139 500.4 1003 38.8
Prupe.3G265200 Prunus persica HOM05D006569 ORTHO05D007515 4.1e-139 500.4 1020 40.8
Peaxi162Scf00011g00263 Petunia axillaris HOM05D006569 ORTHO05D007515 1.2e-138 498.8 959 41.2
FAN02G1154 Fragaria x ananassa HOM05D006569 ORTHO05D007515 7.8e-138 496.1 1033 43.1
Hund15592 Selenicereus undatus HOM05D006569 ORTHO05D007515 1.3e-137 495.4 1010 39.7
CAN.G1103.13 Capsicum annuum HOM05D006569 ORTHO05D007515 7.3e-136 489.6 739 42.5
Eucgr.I01955 Eucalyptus grandis HOM05D006569 ORTHO05D007515 1.1e-134 485.7 1010 38.0
Haze_14089 Corylus avellana HOM05D006569 ORTHO05D007515 1.8e-134 485.0 1044 49.1
DCAR_021661 Daucus carota HOM05D006569 ORTHO05D007515 1.8e-134 485.0 737 47.9
Cfa007985 Carpinus fangiana HOM05D006569 ORTHO05D007515 8.3e-132 476.1 955 52.5
ClCG09G010340 Citrullus lanatus HOM05D006569 ORTHO05D007515 3.5e-130 470.7 1012 46.7
MELO3C023650.2 Cucumis melo HOM05D006569 ORTHO05D007515 3.5e-130 470.7 1012 40.4
Sp6g28790 Schrenkiella parvula HOM05D006569 ORTHO05D007515 6.2e-127 459.9 975 40.1
Ciclev10013587m.g Citrus clementina HOM05D006569 ORTHO05D007515 3.1e-126 457.6 1051 40.2
Sc10g0003480 Simmondsia chinensis HOM05D006569 ORTHO05D007515 5.2e-126 456.8 1031 40.3
Psat5g175080 Pisum sativum HOM05D006569 ORTHO05D007515 1.9e-123 448.4 982 38.3
Medtr3g053000 Medicago truncatula HOM05D006569 ORTHO05D007515 4.6e-122 443.7 998 35.9
AL6G26150 Arabidopsis lyrata HOM05D006569 ORTHO05D007515 7.8e-122 443.0 1058 33.1
FvH4_6g48150 Fragaria vesca HOM05D006569 ORTHO05D007515 2.3e-121 441.4 879 40.3
Lj6g0009481 Lotus japonicus HOM05D006569 ORTHO05D007515 8.6e-121 439.5 1019 36.0
ECA238G4289 Erigeron canadensis HOM05D006569 ORTHO05D007515 7.3e-120 436.4 897 39.1
Thhalv10012473m.g Eutrema salsugineum HOM05D006569 ORTHO05D007515 9.5e-120 436.0 1004 39.1
Carub.0006s1347 Capsella rubella HOM05D006569 ORTHO05D007515 3.6e-119 434.1 1063 35.1
CARHR198030 Cardamine hirsuta HOM05D006569 ORTHO05D007515 8.1e-119 433.0 1058 36.1
EL10Ac2g03001 Beta vulgaris HOM05D006569 ORTHO05D007515 1.4e-118 432.2 1000 37.9
AT5G15280 Arabidopsis thaliana HOM05D006569 ORTHO05D007515 4.0e-118 430.6 1059 34.8
Sed0017024 Sechium edule HOM05D006569 ORTHO05D007515 1.2e-117 429.1 1013 39.4
Duzib264G1306 Durio zibethinus HOM05D006569 ORTHO05D007515 4.4e-117 427.2 682 48.1
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 2.9e-116 424.5 1061 39.5
PGR004G0299 Punica granatum HOM05D006569 ORTHO05D007515 3.8e-116 424.1 1011 37.6
Aqoxy3G03442 Aquilegia oxysepala HOM05D006569 ORTHO05D007515 4.9e-116 423.7 717 45.7
RcHm_v2.0_Chr2g0167491 Rosa chinensis HOM05D006569 ORTHO05D007515 9.2e-115 419.5 1055 35.4
Ah.10g031720 Amaranthus hybridus HOM05D006569 ORTHO05D007515 1.2e-114 419.1 969 38.0
BcaNung03317 Brassica carinata HOM05D006569 ORTHO05D007515 1.2e-114 419.1 985 38.3
AUR62034434 Chenopodium quinoa HOM05D006569 ORTHO05D007515 1.8e-110 405.2 1064 38.0
TPR.G33795 Trifolium pratense HOM05D006569 ORTHO05D007515 1.8e-110 405.2 976 39.3
PSO013G0141 Papaver somniferum HOM05D006569 ORTHO05D007515 4.4e-109 400.6 732 46.2
PSO832G0544 Papaver somniferum HOM05D006569 ORTHO05D007515 5.8e-109 400.2 732 46.9
THA.LOC104822352 Tarenaya hassleriana HOM05D006569 ORTHO05D007515 6.4e-108 396.7 888 34.7
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 4.2e-107 394.0 952 29.0
BraA02t05270Z Brassica rapa HOM05D006569 ORTHO05D007515 7.8e-106 389.8 975 33.1
Ca_14754_v3 Cicer arietinum L. HOM05D006569 ORTHO05D007515 6.2e-103 380.2 897 38.2
Aa31LG11G14260 Aethionema arabicum HOM05D006569 ORTHO05D007515 1.1e-99 369.4 1019 36.6
Zm00001eb005280 Zea mays HOM05D006569 ORTHO05D007515 3.2e-99 367.9 1013 26.7
Glyma.18G093100 Glycine max HOM05D006569 ORTHO05D007515 1.6e-98 365.5 976 35.6
VMungo0540G0528 Vigna mungo HOM05D006569 ORTHO05D007515 6.9e-94 350.1 969 35.5
C02p07640 Brassica napus HOM05D006569 ORTHO05D007515 1.2e-90 339.3 977 30.8
MBI05_g41591_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 1.6e-90 339.0 990 35.3
BcaC03g13417 Brassica carinata HOM05D006569 ORTHO05D007515 2.1e-90 338.6 977 30.8
BolC2t06696H Brassica oleracea HOM05D006569 ORTHO05D007515 6.0e-90 337.0 977 30.8
HPP92_012798 Vanilla planifolia HOM05D006569 ORTHO05D007515 2.2e-79 302.0 907 25.5
A02p02990 Brassica napus HOM05D006569 ORTHO05D007515 9.4e-75 286.6 630 40.3
ATR1145G048 Amborella trichopoda HOM05D006569 ORTHO05D007515 1.4e-70 272.7 956 41.9
CDE04G0154 Ceratophyllum demersum HOM05D006569 ORTHO05D007515 3.4e-69 268.1 588 28.7
FAN09G3888 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.4e-65 256.1 626 43.1
MBI05_g10764_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 1.0e-60 240.0 882 29.6
FAN09G1632 Fragaria x ananassa HOM05D006569 ORTHO05D007515 6.3e-55 220.7 285 44.9
COL.COLO4_10330 Corchorus olitorius HOM05D006569 ORTHO05D007515 7.7e-53 213.8 269 42.0
FvH4_6g47953 Fragaria vesca HOM05D006569 ORTHO05D007515 1.2e-48 199.9 317 53.6
FAN05G1756 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.7e-47 196.1 326 56.7
RcHm_v2.0_Chr2g0167581 Rosa chinensis HOM05D006569 ORTHO05D007515 2.8e-47 195.3 216 49.5
Phvul.006G046500 Phaseolus vulgaris HOM05D006569 ORTHO05D007515 9.4e-43 180.3 575 30.4
Thecc.04G085700 Theobroma cacao HOM05D006569 ORTHO05D007515 9.4e-43 180.3 209 47.8
Glyma.18G108202 Glycine max HOM05D006569 ORTHO05D007515 1.1e-38 166.8 210 45.2
RcHm_v2.0_Chr2g0167571 Rosa chinensis HOM05D006569 ORTHO05D007515 2.0e-37 162.5 179 44.1
FvH4_6g48880 Fragaria vesca HOM05D006569 ORTHO05D007515 3.5e-37 161.8 185 49.7
QL93p0100_0341 Quercus lobata HOM05D006569 ORTHO05D007515 2.1e-34 152.5 500 26.0
QL02p057930 Quercus lobata HOM05D006569 ORTHO05D007515 6.1e-34 151.0 500 26.0
FAN14G0320 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.0e-28 133.7 193 40.9
FvH4_6g47954 Fragaria vesca HOM05D006569 ORTHO05D007515 3.9e-28 131.7 193 40.4
QL08p010038 Quercus lobata HOM05D006569 ORTHO05D007515 2.1e-26 125.9 434 37.8
HPP92_012677 Vanilla planifolia HOM05D006569 ORTHO05D007515 1.6e-21 109.8 409 28.1
Os03g0168400 Oryza sativa ssp. japonica HOM05D006569 ORTHO05D007515 3.0e-20 105.5 178 36.0
Medtr3g052970 Medicago truncatula HOM05D006569 ORTHO05D007515 3.4e-16 92.0 106 47.2
HanXRQChr05g0134551 Helianthus annuus HOM05D006569 ORTHO05D007515 2.2e-15 89.4 103 43.7
SEGI_17455 Sequoiadendron giganteum HOM05D006569 ORTHO05D007515 2.9e-15 89.0 514 38.7
ATR0974G001 Amborella trichopoda HOM05D006569 ORTHO05D007515 6.6e-12 77.8 83 47.0
Thecc.04G085800 Theobroma cacao HOM05D006569 ORTHO05D007515 1.1e-11 77.0 175 32.6
FAN05G1232 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.2e-10 73.6 117 40.2
FAN09G4849 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.8e-09 69.7 125 36.8
MBI05_g36424_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 4.0e-09 68.6 46 58.7
CiPaw.11G043600 Carya illinoinensis HOM05D002453 ORTHO05D002107 7.6e-08 64.3 217 26.3
COL.COLO4_24521 Corchorus olitorius HOM05D002453 ORTHO05D002107 7.6e-08 64.3 211 26.5
Glyma.08G319450 Glycine max HOM05D006569 ORTHO05D007515 8.4e-07 60.8 166 22.9
HanXRQChr16g0524351 Helianthus annuus HOM05D006569 ORTHO05D007515 8.4e-07 60.8 85 32.9
HPP92_016423 Vanilla planifolia HOM05D000001 ORTHO05D000003 1.1e-06 60.5 130 30.0
Lsat_1_v5_gn_1_46480 Lactuca sativa HOM05D001126 ORTHO05D000991 1.4e-06 60.1 103 38.8
CiPaw.09G148500 Carya illinoinensis HOM05D006556 ORTHO05D008146 1.9e-06 59.7 245 26.5
Nitab4.5_0003441g0070 Nicotiana tabacum HOM05D005362 ORTHO05D006895 2.4e-06 59.3 392 22.2
PGSC0003DMG400024629 Solanum tuberosum HOM05D005362 ORTHO05D006895 7.1e-06 57.8 347 21.3


User provided reference genes

Program Settings