Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 0.0e+00 1168.3 587 100.0
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.3e-252 876.3 589 78.6
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 3.1e-238 828.6 575 74.3
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 7.9e-234 813.9 584 74.7
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 7.9e-234 813.9 583 74.8
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.7e-232 807.7 588 73.1
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.2e-229 800.0 569 74.2
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.6e-229 798.9 588 72.4
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 1.7e-228 796.2 573 72.6
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 7.0e-214 747.7 582 68.7
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.1e-211 740.3 570 68.4
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 4.8e-207 724.9 593 65.9
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 4.5e-205 718.4 538 71.0
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 7.2e-203 711.1 612 65.0
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 6.1e-202 708.0 587 66.4
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 3.4e-200 702.2 552 69.6
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 4.4e-200 701.8 511 72.8
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 4.4e-200 701.8 498 71.7
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.3e-199 700.3 527 71.0
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.3e-199 700.3 537 69.6
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 1.7e-199 699.9 584 65.2
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.8e-199 698.4 600 64.8
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 4.8e-199 698.4 614 63.0
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 4.1e-198 695.3 484 74.0
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.6e-197 693.3 494 71.7
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 2.0e-197 693.0 547 68.2
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 2.0e-197 693.0 505 72.1
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 2.7e-197 692.6 592 65.0
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 5.9e-197 691.4 514 71.0
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.0e-196 690.6 597 63.8
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.7e-196 689.9 606 63.5
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 2.2e-196 689.5 595 64.5
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 2.9e-196 689.1 613 62.5
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 2.9e-196 689.1 594 63.3
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 8.5e-196 687.6 610 62.6
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.1e-195 687.2 584 64.4
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.9e-195 686.4 601 63.6
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 2.5e-195 686.0 510 71.2
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 2.5e-195 686.0 534 70.2
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 3.2e-195 685.6 593 62.9
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 4.2e-195 685.3 611 62.7
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 1.2e-194 683.7 502 70.5
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 1.2e-194 683.7 595 63.5
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 2.7e-194 682.6 586 63.8
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.0e-193 680.6 595 63.4
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.4e-193 680.2 614 62.1
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 2.3e-193 679.5 592 64.0
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 6.8e-193 677.9 494 71.3
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 8.8e-193 677.6 586 63.1
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.5e-192 676.8 413 81.4
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 2.0e-192 676.4 611 61.5
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 1.7e-191 673.3 482 73.0
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.7e-191 673.3 597 62.1
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 2.8e-191 672.5 491 70.1
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 6.3e-191 671.4 577 63.4
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.1e-190 670.6 608 62.7
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.1e-190 670.6 540 66.1
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.8e-190 669.8 451 75.4
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 3.1e-190 669.1 450 75.3
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 7.0e-190 667.9 608 61.0
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 1.2e-189 667.2 578 62.6
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.6e-189 666.8 615 60.2
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 2.0e-189 666.4 601 62.9
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 2.7e-189 666.0 539 67.3
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 5.9e-189 664.8 497 68.4
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 5.9e-189 664.8 614 62.5
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.7e-188 663.3 614 59.4
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.9e-188 662.5 555 65.8
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.9e-188 662.5 614 59.6
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 2.9e-188 662.5 462 74.0
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 2.9e-188 662.5 601 60.7
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 5.0e-188 661.8 570 63.9
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 5.0e-188 661.8 409 80.0
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 8.6e-188 661.0 565 63.5
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 1.5e-187 660.2 404 80.7
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.5e-187 659.4 613 61.3
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 5.6e-187 658.3 407 79.4
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 9.5e-187 657.5 634 59.1
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 9.5e-187 657.5 601 61.1
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 1.2e-186 657.1 489 69.1
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.6e-186 656.8 599 62.4
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 2.1e-186 656.4 491 69.5
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 8.0e-186 654.4 394 81.2
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.0e-185 654.1 405 80.5
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.4e-185 653.7 413 78.2
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.8e-185 653.3 612 60.8
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.8e-185 653.3 611 60.9
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 4.0e-185 652.1 600 60.7
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 5.2e-185 651.7 396 80.6
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 5.2e-185 651.7 590 61.4
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 1.5e-184 650.2 396 80.8
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 5.7e-184 648.3 407 77.9
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 5.7e-184 648.3 534 66.3
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.7e-183 646.7 404 79.0
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 2.9e-183 646.0 406 78.8
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.1e-182 642.1 451 73.4
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 7.0e-182 641.3 429 74.6
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.6e-181 640.2 418 77.8
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 1.6e-181 640.2 436 72.9
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 5.9e-181 638.3 592 61.5
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 1.3e-180 637.1 484 67.8
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 5.0e-180 635.2 597 59.6
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 8.6e-180 634.4 604 59.8
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.1e-179 634.0 469 70.1
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.5e-179 633.6 493 67.5
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 3.3e-179 632.5 532 64.1
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 8.0e-178 627.9 498 65.9
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 1.2e-176 624.0 478 70.1
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.4e-176 622.1 408 75.7
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 7.5e-176 621.3 547 60.7
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 2.2e-175 619.8 487 66.3
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 1.4e-174 617.1 474 67.5
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 2.4e-174 616.3 474 67.5
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 7.0e-174 614.8 474 67.3
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 9.2e-174 614.4 558 60.4
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 9.2e-174 614.4 474 67.3
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 1.6e-173 613.6 389 77.1
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 1.6e-173 613.6 371 80.9
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 3.5e-173 612.5 474 67.1
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 4.6e-173 612.1 571 58.8
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 7.8e-173 611.3 554 60.5
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 2.3e-172 609.8 387 77.8
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 2.3e-172 609.8 537 61.5
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.9e-172 609.0 493 66.1
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 3.9e-172 609.0 482 65.8
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 6.6e-172 608.2 476 66.6
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 8.6e-172 607.8 588 58.2
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 2.5e-171 606.3 584 58.4
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 2.5e-171 606.3 584 58.4
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 2.5e-171 606.3 584 58.4
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 1.6e-170 603.6 580 59.0
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 4.7e-170 602.1 570 59.1
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 4.7e-170 602.1 570 59.1
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 9.5e-163 577.8 385 73.2
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.1e-161 572.8 353 79.9
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.3e-155 552.7 577 56.3
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 4.8e-146 522.3 410 63.9
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.2e-143 513.5 343 72.3
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.1e-142 511.1 400 65.0
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 7.4e-139 498.4 516 54.1
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 3.9e-132 476.1 347 68.6
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.1e-129 468.0 310 72.3
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 2.5e-126 456.8 375 64.3
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 1.4e-97 361.3 209 81.3
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 1.3e-95 354.8 377 50.9
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 2.6e-91 340.5 197 81.2
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.1e-89 335.1 398 54.3
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 3.1e-81 307.0 180 80.0
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.7e-75 286.2 159 83.6
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 7.5e-75 285.8 246 60.2
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.8e-73 281.2 156 84.0
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.8e-73 281.2 156 84.0
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.1e-65 255.4 379 42.5
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 2.3e-63 247.7 363 39.1
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 9.2e-57 225.7 163 72.4
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 1.5e-54 218.4 304 39.8
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 4.9e-50 203.4 127 81.1
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.5e-46 191.8 300 37.3
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 2.7e-40 171.0 109 75.2
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 1.2e-35 155.6 225 47.6
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.0e-35 154.8 163 52.8
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.4e-35 154.1 110 66.4
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 9.3e-33 146.0 88 76.1
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 6.6e-31 139.8 254 34.6
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 2.5e-30 137.9 143 52.4
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 1.6e-29 135.2 83 73.5
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 3.1e-28 131.0 83 71.1
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 5.3e-28 130.2 100 67.0
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 2.5e-22 111.3 103 52.4
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 2.1e-21 108.2 120 50.8
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 1.4e-12 79.0 99 48.5
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 4.0e-12 77.4 173 33.5
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 2.6e-11 74.7 111 40.5
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.0e-10 72.8 43 81.4
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.9e-09 68.6 91 47.3
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 4.3e-06 57.4 32 78.1
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 5.7e-06 57.0 73 46.6


User provided reference genes

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