Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 2.1e-100 369.0 186 100.0
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 4.8e-68 261.5 190 71.1
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 2.6e-66 255.8 186 70.4
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.4e-66 255.4 190 68.9
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 6.5e-65 251.1 155 79.4
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 8.5e-65 250.8 191 68.6
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.9e-64 249.6 180 70.6
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 2.5e-64 249.2 186 67.2
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 7.2e-64 247.7 186 71.0
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 2.1e-63 246.1 139 84.9
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 3.6e-63 245.4 189 67.2
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 3.6e-63 245.4 158 79.1
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 3.6e-63 245.4 193 65.8
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 6.1e-63 244.6 190 68.4
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 1.0e-62 243.8 180 72.8
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.8e-62 243.0 152 77.0
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.8e-62 243.0 152 79.6
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 3.0e-62 242.3 145 79.3
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 5.1e-62 241.5 195 64.1
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 6.7e-62 241.1 163 73.6
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 8.8e-62 240.7 151 78.1
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 8.8e-62 240.7 193 64.8
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 8.8e-62 240.7 154 77.3
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 8.8e-62 240.7 155 75.5
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 1.1e-61 240.4 180 68.3
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 1.5e-61 240.0 183 67.8
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 2.0e-61 239.6 188 69.1
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.0e-61 239.6 156 76.9
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 2.0e-61 239.6 147 76.2
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 2.5e-61 239.2 182 68.1
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 2.5e-61 239.2 146 77.4
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 2.5e-61 239.2 156 77.6
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 3.3e-61 238.8 141 78.0
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 9.7e-61 237.3 190 63.7
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 1.3e-60 236.9 153 75.2
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.3e-60 236.9 188 62.2
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.3e-60 236.9 157 76.4
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 2.8e-60 235.7 181 66.3
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 3.7e-60 235.3 146 76.0
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 6.3e-60 234.6 158 73.4
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 8.2e-60 234.2 153 75.8
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 8.2e-60 234.2 153 76.5
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 1.1e-59 233.8 153 75.2
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 1.1e-59 233.8 204 62.3
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 1.1e-59 233.8 140 79.3
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 1.4e-59 233.4 166 69.3
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.8e-59 233.0 188 66.5
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 2.4e-59 232.6 140 80.0
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 5.3e-59 231.5 147 75.5
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 6.9e-59 231.1 187 63.6
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 6.9e-59 231.1 186 65.6
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 2.0e-58 229.6 137 81.0
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 4.5e-58 228.4 186 62.9
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 1.0e-57 227.3 147 74.1
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 1.7e-57 226.5 182 63.7
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 2.5e-56 222.6 155 72.3
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 2.5e-56 222.6 155 72.9
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 2.5e-56 222.6 184 64.1
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 5.5e-56 221.5 153 72.5
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 5.5e-56 221.5 173 67.6
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.2e-55 220.3 187 63.1
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 6.1e-55 218.0 136 75.0
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 1.4e-54 216.9 164 67.7
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 1.8e-54 216.5 164 68.3
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 1.8e-54 216.5 154 68.8
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 2.3e-54 216.1 151 70.9
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 5.1e-54 214.9 164 68.3
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 5.1e-54 214.9 164 68.3
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 5.1e-54 214.9 164 68.3
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 5.1e-54 214.9 164 68.3
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 5.1e-54 214.9 164 68.3
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 5.1e-54 214.9 164 68.3
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 5.1e-54 214.9 185 61.1
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 5.1e-54 214.9 155 71.0
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 8.8e-54 214.2 167 64.1
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.6e-53 212.6 153 69.9
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 7.4e-53 211.1 183 61.2
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.8e-52 209.1 182 61.5
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 2.8e-52 209.1 158 68.4
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 4.8e-52 208.4 164 66.5
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.1e-51 207.2 164 66.5
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.1e-51 207.2 164 66.5
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.8e-51 206.5 158 66.5
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.4e-51 206.1 173 63.6
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 2.4e-51 206.1 194 58.2
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 2.4e-51 206.1 188 56.9
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.3e-49 200.3 212 56.1
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 5.0e-49 198.4 135 65.9
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 6.5e-49 198.0 154 66.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.5e-49 198.0 177 61.6
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 2.3e-46 189.5 179 56.4
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.5e-45 186.8 149 65.1
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.6e-45 186.0 113 74.3
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 7.0e-43 177.9 163 59.5
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.7e-41 173.3 126 71.4
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.2e-37 160.6 200 50.5
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 3.3e-37 159.1 183 51.4
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 7.7e-34 147.9 150 50.0
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 6.5e-33 144.8 140 51.4
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 1.0e-30 137.5 85 74.1
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 9.8e-29 131.0 160 46.9
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.1e-24 117.5 68 75.0
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.2e-21 107.5 81 61.7
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.4e-19 99.8 113 53.1
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 2.7e-18 96.3 106 57.5
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.5e-16 89.7 54 72.2
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 2.8e-15 86.3 67 59.7
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 3.6e-15 85.9 94 57.4
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 8.0e-15 84.7 87 62.1
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 6.4e-12 75.1 62 58.1
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.1e-08 64.3 37 70.3
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 6.8e-06 55.1 108 32.4


User provided reference genes

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