Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.9e-147 525.8 264 100.0
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 2.3e-116 422.5 264 81.1
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.5e-115 419.9 263 79.8
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 5.7e-99 364.8 242 77.7
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 5.7e-99 364.8 255 74.5
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 2.2e-98 362.8 239 78.2
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 8.2e-98 360.9 272 71.3
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 2.4e-97 359.4 277 70.4
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 4.1e-97 358.6 274 69.7
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 9.1e-97 357.5 260 73.8
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.2e-96 357.1 270 71.9
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 3.5e-96 355.5 274 71.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 4.5e-96 355.1 249 74.7
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 7.7e-96 354.4 276 69.6
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.0e-95 354.0 233 79.4
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.3e-95 353.6 277 69.7
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 2.2e-95 352.8 259 72.2
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.9e-95 352.4 233 79.4
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 8.5e-95 350.9 264 71.6
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.9e-94 349.7 275 68.0
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.9e-94 349.7 275 68.0
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.5e-94 349.4 259 71.4
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 4.2e-94 348.6 268 71.3
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 7.2e-94 347.8 226 79.2
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.6e-93 346.7 234 78.2
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.1e-93 346.3 271 66.8
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.1e-93 346.3 202 87.1
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.7e-93 345.9 253 71.1
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 4.7e-93 345.1 221 80.5
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 6.1e-93 344.7 204 83.3
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 1.8e-92 343.2 264 68.9
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 6.8e-92 341.3 267 69.7
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 8.8e-92 340.9 245 73.1
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.5e-91 340.1 262 71.0
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 2.0e-91 339.7 263 69.6
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.6e-91 339.3 227 74.4
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 4.4e-91 338.6 227 73.6
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 9.8e-91 337.4 262 71.0
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.3e-90 337.0 268 69.4
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 3.7e-90 335.5 263 65.8
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 6.3e-90 334.7 230 76.5
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 6.3e-90 334.7 232 76.3
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 8.3e-90 334.3 264 68.9
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 2.4e-89 332.8 271 67.5
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.1e-89 332.0 271 66.1
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 9.1e-89 330.9 268 66.8
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.5e-88 328.9 202 80.7
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 4.5e-88 328.6 269 66.9
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 4.5e-88 328.6 230 73.5
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.5e-88 328.6 268 66.0
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 4.5e-88 328.6 265 67.5
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 2.2e-87 326.2 186 86.6
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 2.2e-87 326.2 219 77.6
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.9e-87 325.9 234 70.9
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 5.0e-87 325.1 279 66.3
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 5.0e-87 325.1 277 66.1
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 8.5e-87 324.3 243 70.8
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.9e-86 323.2 203 81.8
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.2e-86 322.0 198 81.8
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 5.5e-86 321.6 202 78.2
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 9.4e-86 320.9 192 87.0
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 9.4e-86 320.9 207 81.2
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.2e-85 320.5 197 81.2
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.2e-85 320.5 236 76.3
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.6e-85 320.1 235 73.2
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.1e-85 319.7 271 65.7
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 4.7e-85 318.5 196 82.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.7e-85 318.5 197 83.2
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.4e-84 317.0 197 82.7
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 8.8e-84 314.3 270 65.9
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 8.8e-84 314.3 251 69.3
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 8.8e-84 314.3 213 77.0
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.2e-83 313.9 186 84.4
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.2e-83 313.9 198 82.8
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.5e-83 313.5 276 64.9
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 2.0e-83 313.2 234 75.2
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 3.4e-83 312.4 245 69.4
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 4.4e-83 312.0 219 74.0
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 4.4e-83 312.0 228 72.4
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 5.7e-83 311.6 186 82.3
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 7.5e-83 311.2 274 65.0
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 9.8e-83 310.8 274 64.2
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 9.8e-83 310.8 266 65.4
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 9.8e-83 310.8 266 65.0
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 9.8e-83 310.8 239 69.9
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 9.8e-83 310.8 200 81.0
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.3e-82 310.5 268 65.3
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.7e-82 310.1 218 74.3
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.7e-82 310.1 218 74.3
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.7e-82 310.1 191 84.3
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 2.8e-82 309.3 218 74.3
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 2.8e-82 309.3 269 65.1
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 3.1e-81 305.8 188 81.9
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 4.1e-81 305.4 274 63.1
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 4.1e-81 305.4 274 63.1
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 1.6e-80 303.5 266 63.9
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 8.6e-79 297.7 190 78.4
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 7.3e-78 294.7 187 77.0
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 8.0e-77 291.2 188 78.7
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 3.2e-73 279.3 242 65.7
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 5.4e-73 278.5 263 58.6
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.0e-72 276.6 195 69.2
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 6.2e-69 265.0 190 67.9
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 2.4e-65 253.1 205 63.9
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 5.4e-65 251.9 229 62.4
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 4.6e-64 248.8 198 63.6
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.1e-56 223.4 140 80.0
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.0e-55 221.1 275 50.9
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 8.6e-55 218.0 135 85.9
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 7.3e-54 214.9 177 67.2
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 7.1e-49 198.4 217 48.8
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 2.1e-48 196.8 204 56.4
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 7.8e-48 194.9 109 85.3
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 3.0e-47 193.0 199 51.8
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.3e-42 177.6 134 69.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.8e-42 176.0 109 76.1
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 3.1e-36 156.4 188 45.2
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.0e-28 129.4 126 64.3
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.7e-24 116.7 83 72.3
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.3e-15 87.8 71 64.8
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.6e-13 80.9 47 83.0
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-13 80.1 93 54.8
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.4e-09 67.8 44 65.9
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 1.9e-09 67.4 44 72.7
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 6.7e-07 58.9 65 53.8


User provided reference genes

Program Settings