Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 6.8e-229 797.0 397 100.0
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 2.5e-162 575.9 400 73.5
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 3.0e-152 542.3 396 69.9
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 8.0e-129 464.5 397 60.2
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 7.4e-127 458.0 397 59.4
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.6e-124 449.5 392 60.2
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 3.5e-124 449.1 396 60.4
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 5.0e-123 445.3 392 59.9
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 3.2e-122 442.6 400 59.0
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 6.8e-120 434.9 387 58.4
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 8.8e-120 434.5 387 58.4
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 1.5e-119 433.7 380 60.5
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 7.0e-117 424.9 388 57.7
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 2.7e-116 422.9 390 56.7
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 2.7e-116 422.9 378 59.5
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 1.6e-113 413.7 384 56.8
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 3.6e-113 412.5 384 56.8
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 5.2e-112 408.7 384 56.0
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 5.2e-112 408.7 335 61.5
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 5.2e-112 408.7 404 55.9
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 6.8e-112 408.3 298 66.8
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 6.8e-112 408.3 398 56.5
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 6.8e-112 408.3 385 56.4
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 1.5e-111 407.1 391 56.8
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 2.0e-111 406.8 345 60.6
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 4.4e-111 405.6 380 57.4
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.3e-110 404.1 315 62.5
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 6.3e-110 401.7 380 55.3
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 1.1e-109 401.0 396 55.6
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 1.8e-109 400.2 319 63.6
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 2.4e-109 399.8 376 58.8
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 4.1e-109 399.1 317 60.9
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 7.0e-109 398.3 418 53.1
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 9.1e-109 397.9 311 62.4
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 2.7e-108 396.4 379 53.6
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 4.5e-108 395.6 391 55.2
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 4.5e-108 395.6 381 56.4
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 2.9e-107 392.9 318 61.3
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 6.6e-107 391.7 380 54.5
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 1.1e-106 391.0 292 65.4
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 4.2e-106 389.0 403 54.1
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 5.5e-106 388.7 349 55.6
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 1.6e-105 387.1 395 52.2
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 2.1e-105 386.7 396 54.8
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 4.0e-104 382.5 295 63.7
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.0e-103 380.2 310 60.3
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 2.6e-103 379.8 385 53.8
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 3.4e-103 379.4 293 62.8
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 8.3e-102 374.8 324 59.9
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 1.1e-101 374.4 358 55.9
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 1.4e-101 374.0 325 59.1
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 1.8e-101 373.6 385 52.7
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 2.4e-101 373.2 339 58.4
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 3.2e-101 372.9 382 52.9
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 3.2e-101 372.9 392 50.8
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 9.2e-101 371.3 328 58.2
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 2.7e-100 369.8 385 52.7
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 2.7e-100 369.8 339 56.6
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 5.9e-100 368.6 336 57.7
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.0e-99 367.9 383 53.0
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 1.0e-99 367.9 349 54.4
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 1.3e-99 367.5 385 53.5
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 1.7e-99 367.1 376 53.7
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.3e-99 366.7 351 55.6
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 8.6e-99 364.8 372 53.0
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 1.1e-98 364.4 332 57.2
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.5e-98 364.0 323 54.8
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.3e-98 362.8 349 55.9
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 5.6e-98 362.1 332 56.6
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 7.3e-98 361.7 312 56.4
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 7.3e-98 361.7 312 56.4
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 2.3e-96 356.7 340 56.2
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 2.3e-96 356.7 428 49.1
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 5.2e-96 355.5 345 55.1
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 5.2e-96 355.5 390 49.0
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 8.9e-96 354.8 347 54.8
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 1.2e-95 354.4 381 50.4
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 4.4e-95 352.4 278 60.4
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-94 350.9 326 53.1
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 2.9e-94 349.7 392 47.7
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 3.7e-94 349.4 317 56.8
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 8.3e-94 348.2 393 49.9
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 8.3e-94 348.2 296 59.8
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 1.9e-93 347.1 372 51.6
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 9.2e-93 344.7 415 46.3
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 4.6e-92 342.4 386 47.4
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 2.5e-90 336.7 380 51.1
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 1.6e-89 334.0 355 51.8
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 2.1e-89 333.6 390 46.9
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 3.6e-89 332.8 308 54.5
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.3e-88 330.1 385 49.6
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 8.9e-88 328.2 235 67.7
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.1e-85 321.2 238 65.5
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 1.4e-85 320.9 299 53.5
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 4.1e-85 319.3 310 50.3
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 5.1e-75 285.8 339 43.4
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 2.8e-73 280.0 225 60.0
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 4.7e-73 279.3 255 56.5
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 5.2e-72 275.8 334 43.4
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 6.0e-68 262.3 366 39.9
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 9.6e-66 255.0 191 67.5
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 3.1e-56 223.4 170 63.5
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.1e-53 214.9 240 49.2
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 7.1e-53 212.2 264 47.3
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 1.1e-45 188.3 179 49.7
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 2.5e-45 187.2 183 54.6
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 7.1e-45 185.7 203 46.8
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 1.3e-43 181.4 321 35.8
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 8.7e-43 178.7 333 33.3
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 4.3e-42 176.4 312 35.6
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.7e-38 164.5 188 47.3
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 2.9e-38 163.7 146 58.2
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 6.1e-36 156.0 258 36.4
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.9e-34 151.0 248 36.7
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.7e-33 146.7 296 32.8
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.4e-32 144.1 255 35.7
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-31 141.7 262 34.4
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 7.7e-31 139.0 244 32.0
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 4.2e-29 133.3 146 46.6
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.6e-28 131.3 252 34.9
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.1e-28 131.0 136 48.5
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 6.1e-28 129.4 290 31.0
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.7e-25 121.3 163 42.3
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.9e-19 100.1 207 29.5
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 2.0e-18 97.8 137 40.9
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 8.0e-12 75.9 136 36.8
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 6.3e-09 66.2 81 45.7


User provided reference genes

Program Settings