Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 1.7e-104 382.9 216 100.0
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 1.3e-48 197.2 216 63.4
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 6.0e-38 161.8 215 56.3
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 1.0e-37 161.0 219 59.4
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 7.3e-36 154.8 227 52.4
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 1.1e-34 151.0 223 54.7
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 3.2e-31 139.4 214 52.8
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 1.0e-29 134.4 212 52.8
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 1.8e-29 133.7 215 48.8
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 3.3e-28 129.4 219 42.9
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 1.6e-27 127.1 221 44.8
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 1.7e-24 117.1 232 44.8
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 8.4e-24 114.8 202 39.1
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.6e-22 109.0 224 48.2
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.0e-21 107.8 226 44.7
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.8e-21 107.1 226 47.3
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 2.3e-21 106.7 232 39.7
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.3e-21 106.7 224 47.3
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 2.3e-21 106.7 224 47.3
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 3.9e-21 105.9 226 46.9
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 3.9e-21 105.9 211 48.8
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 6.7e-21 105.1 220 46.8
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 8.7e-21 104.8 228 45.2
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 1.5e-20 104.0 225 47.6
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 2.5e-20 103.2 175 53.1
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 4.3e-20 102.4 225 43.6
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 4.3e-20 102.4 228 42.5
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 5.6e-20 102.1 224 43.8
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 7.4e-20 101.7 227 43.6
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 7.4e-20 101.7 229 43.2
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 7.4e-20 101.7 175 53.1
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 9.6e-20 101.3 225 46.7
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.6e-19 100.5 221 44.3
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 1.6e-19 100.5 196 38.8
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 2.1e-19 100.1 231 46.8
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 2.1e-19 100.1 224 42.9
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 2.8e-19 99.8 211 43.1
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 6.2e-19 98.6 243 41.2
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 6.2e-19 98.6 231 43.7
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 1.1e-18 97.8 203 42.9
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 1.8e-18 97.1 213 37.1
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 5.3e-18 95.5 224 45.1
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 1.5e-17 94.0 206 36.4
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 2.6e-17 93.2 82 63.4
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 4.5e-17 92.4 85 63.5
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 7.6e-17 91.7 229 44.5
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.7e-16 90.5 228 40.4
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.7e-16 90.5 228 40.4
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 3.8e-16 89.4 229 41.9
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 4.9e-16 89.0 198 43.4
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 6.5e-16 88.6 182 51.6
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 8.4e-16 88.2 198 42.9
unitig_899.g15293 Utricularia gibba HOM05D007784 ORTHO05D008654 8.4e-16 88.2 208 31.7
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 1.1e-15 87.8 238 32.8
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 3.2e-15 86.3 224 38.8
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 3.2e-15 86.3 176 40.3
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 3.2e-15 86.3 211 34.1
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 3.2e-15 86.3 235 41.3
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 5.5e-15 85.5 211 44.5
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 9.3e-15 84.7 233 41.2
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 9.3e-15 84.7 205 42.0
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.2e-14 84.3 228 41.7
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 2.7e-14 83.2 227 40.1
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 4.6e-14 82.4 189 40.7
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 1.3e-13 80.9 238 39.5
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 1.8e-13 80.5 207 39.6
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 2.3e-13 80.1 223 41.7
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 2.3e-13 80.1 182 44.5
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 3.0e-13 79.7 234 41.5
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 3.9e-13 79.3 206 41.7
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 5.1e-13 79.0 231 39.8
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 8.7e-13 78.2 206 39.8
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 8.7e-13 78.2 206 39.8
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.1e-12 77.8 217 35.0
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 1.1e-12 77.8 213 42.3
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 1.1e-12 77.8 209 37.8
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 1.1e-12 77.8 213 35.2
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 1.5e-12 77.4 228 40.4
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 1.9e-12 77.0 208 36.5
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 5.7e-12 75.5 260 40.8
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 5.7e-12 75.5 210 32.9
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 5.7e-12 75.5 223 38.6
Actinidia12799 Actinidia chinensis HOM05D000223 ORTHO05D000736 1.3e-11 74.3 155 48.4
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 6.3e-11 72.0 264 37.5
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 1.4e-10 70.9 205 40.5
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 1.8e-10 70.5 260 39.2
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 3.1e-10 69.7 256 37.5
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 4.1e-10 69.3 169 44.4
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 5.3e-10 68.9 215 37.7
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 2.6e-09 66.6 256 29.7
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 4.5e-09 65.9 164 35.4
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 7.6e-09 65.1 218 39.0
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 1.0e-08 64.7 221 33.0
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 6.5e-08 62.0 91 45.1
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 8.5e-08 61.6 80 51.2
Oeu025364.1 Olea europaea HOM05D007784 ORTHO05D008654 8.5e-08 61.6 101 43.6
Ah.06g184500 Amaranthus hybridus HOM05D007784 ORTHO05D008654 1.1e-07 61.2 250 32.0
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 1.1e-07 61.2 259 27.0
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 1.4e-07 60.8 91 44.0
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 2.5e-07 60.1 258 26.7
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 2.5e-07 60.1 258 26.7
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 2.5e-07 60.1 258 26.7
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.5e-07 60.1 256 27.3
DCAR_019564 Daucus carota HOM05D007784 ORTHO05D008654 3.2e-07 59.7 213 38.0
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 5.5e-07 58.9 82 48.8
ATR0150G022 Amborella trichopoda HOM05D007784 ORTHO05D008654 9.3e-07 58.2 207 32.9
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.6e-06 57.4 97 41.2
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 2.1e-06 57.0 94 43.6
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 4.6e-06 55.8 82 46.3
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 6.1e-06 55.5 84 42.9


User provided reference genes

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