Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 5.9e-169 597.4 300 100.0
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 2.0e-148 529.3 300 87.3
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 2.7e-145 518.8 302 86.4
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 5.1e-144 514.6 302 85.1
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.1e-141 506.9 303 83.8
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 1.1e-141 506.9 300 84.0
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 4.0e-141 505.0 298 84.6
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 8.9e-141 503.8 298 84.2
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 4.4e-140 501.5 307 82.1
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.4e-140 501.5 300 82.7
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 8.4e-139 497.3 298 82.2
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 1.4e-138 496.5 300 81.7
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 1.9e-138 496.1 298 81.5
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.2e-138 495.0 299 82.9
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 9.3e-138 493.8 302 81.1
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.2e-137 493.4 291 83.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.6e-137 493.0 282 85.8
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.7e-137 492.3 298 81.5
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 2.7e-137 492.3 303 79.9
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 2.7e-137 492.3 297 82.5
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 4.6e-137 491.5 282 85.8
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 4.6e-137 491.5 307 80.8
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 4.6e-137 491.5 296 82.1
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 6.0e-137 491.1 294 82.3
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.7e-136 489.6 280 85.4
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.3e-136 489.2 298 81.9
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 3.0e-136 488.8 296 81.8
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 3.0e-136 488.8 291 82.5
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 6.6e-136 487.6 281 85.1
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 1.1e-135 486.9 283 83.7
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.9e-135 486.1 304 80.9
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 2.5e-135 485.7 301 82.1
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 2.5e-135 485.7 294 81.3
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 2.5e-135 485.7 302 79.1
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 3.3e-135 485.3 287 82.6
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.1e-134 482.6 302 79.5
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 2.1e-134 482.6 303 79.2
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 2.8e-134 482.3 294 82.3
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 6.2e-134 481.1 292 79.8
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 6.2e-134 481.1 283 83.4
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 6.2e-134 481.1 300 79.7
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.1e-133 480.3 301 79.1
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 1.4e-133 479.9 287 82.2
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.4e-133 479.9 309 78.0
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 1.8e-133 479.6 296 81.1
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.8e-133 479.6 298 79.9
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.8e-133 479.6 291 81.1
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 1.8e-133 479.6 292 81.5
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 2.4e-133 479.2 289 81.0
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 2.4e-133 479.2 297 78.8
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 2.4e-133 479.2 300 80.3
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 3.1e-133 478.8 287 80.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 3.1e-133 478.8 287 80.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 3.1e-133 478.8 287 80.5
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 4.0e-133 478.4 294 78.6
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 4.0e-133 478.4 302 79.5
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 5.3e-133 478.0 298 79.9
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 5.3e-133 478.0 300 78.3
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 6.9e-133 477.6 293 80.5
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 6.9e-133 477.6 300 77.3
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 9.0e-133 477.2 286 81.5
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 9.0e-133 477.2 293 81.2
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-132 476.9 291 79.0
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.2e-132 476.9 287 80.1
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.2e-132 476.9 302 78.5
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 2.0e-132 476.1 310 77.7
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 4.4e-132 474.9 300 77.7
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 4.4e-132 474.9 290 79.0
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 4.4e-132 474.9 291 79.7
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 4.4e-132 474.9 282 81.6
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 4.4e-132 474.9 304 79.3
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 7.6e-132 474.2 291 80.8
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 7.6e-132 474.2 282 81.6
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.3e-131 473.4 282 81.6
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.3e-131 473.4 298 79.5
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.7e-131 473.0 292 79.5
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 2.2e-131 472.6 300 78.7
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 2.2e-131 472.6 300 77.7
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 3.8e-131 471.9 289 78.9
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 6.4e-131 471.1 300 77.7
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 8.4e-131 470.7 282 79.4
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 1.1e-130 470.3 292 78.1
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.9e-130 469.5 288 79.5
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.9e-130 469.5 300 79.3
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 2.4e-130 469.2 291 79.4
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 9.3e-130 467.2 300 77.7
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 9.3e-130 467.2 295 80.7
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 2.1e-129 466.1 275 82.2
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 2.7e-129 465.7 295 79.0
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.0e-128 463.8 282 80.1
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.0e-128 463.8 303 76.9
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 1.0e-128 463.8 289 79.9
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 1.0e-128 463.8 290 78.3
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.0e-128 463.8 269 85.9
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 2.3e-128 462.6 276 79.7
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.9e-128 461.8 301 76.4
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 3.9e-128 461.8 289 79.6
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 1.9e-127 459.5 293 78.5
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 2.5e-127 459.1 303 76.6
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 7.3e-127 457.6 283 79.9
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 9.6e-127 457.2 311 75.9
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 1.3e-126 456.8 264 83.7
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.6e-126 456.4 289 77.9
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 1.6e-126 456.4 292 78.4
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.8e-126 455.7 302 75.5
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.6e-126 455.3 295 76.3
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.8e-126 454.9 296 76.4
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.4e-125 453.4 268 84.3
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 1.8e-125 453.0 290 76.9
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 3.1e-125 452.2 292 76.7
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 2.0e-124 449.5 300 76.3
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 3.4e-124 448.7 281 77.2
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 1.7e-123 446.4 302 74.8
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 3.8e-123 445.3 296 75.3
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 4.9e-123 444.9 264 85.6
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 1.1e-122 443.7 287 77.4
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 2.4e-122 442.6 284 78.5
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 2.1e-121 439.5 311 71.4
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 4.6e-121 438.3 309 71.5
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 6.0e-121 438.0 302 74.8
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 4.0e-117 425.2 388 61.1
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.1e-114 417.2 273 77.3
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 1.0e-112 410.6 262 77.1
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 3.9e-112 408.7 280 73.2
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 1.5e-111 406.8 279 71.7
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 7.4e-111 404.4 221 88.7
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 4.1e-109 398.7 221 86.4
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.0e-108 396.4 218 86.7
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 2.0e-108 396.4 218 86.7
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 8.4e-107 391.0 248 75.4
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 8.4e-107 391.0 297 65.3
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 5.1e-104 381.7 279 67.0
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 7.4e-103 377.9 249 73.5
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.2e-100 370.5 303 66.0
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 5.1e-96 355.1 289 61.2
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 8.8e-96 354.4 214 80.4
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 7.4e-95 351.3 200 83.5
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 8.2e-94 347.8 215 80.9
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 9.4e-90 334.3 182 87.4
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 7.9e-89 331.3 208 79.8
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 3.9e-88 328.9 182 88.5
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 2.6e-79 299.7 174 83.9
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.1e-77 294.3 221 72.4
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 1.9e-74 283.5 191 75.4
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.4e-72 277.3 152 88.8
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 7.7e-68 261.5 194 68.6
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 3.4e-63 246.1 145 82.1
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 4.7e-57 225.7 209 60.8
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 4.9e-46 189.1 247 46.6
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 6.4e-46 188.7 118 74.6
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 3.5e-44 183.0 157 60.5
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 2.3e-43 180.3 135 68.1
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 1.8e-40 170.6 177 54.8
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 5.2e-40 169.1 105 76.2
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.9e-34 150.6 96 74.0
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 6.2e-33 145.6 86 76.7
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.5e-28 129.8 82 76.8
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 3.5e-28 129.8 209 41.6
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 1.0e-27 128.3 242 36.4
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 1.1e-26 124.8 86 70.9
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 6.2e-25 119.0 170 42.4
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 2.0e-23 114.0 66 83.3
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 2.0e-23 114.0 66 83.3
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.8e-16 90.9 160 38.8
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-16 90.9 83 57.8
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 4.5e-15 86.3 53 73.6
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.6e-15 85.5 64 70.3
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.6e-15 85.5 64 70.3
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 1.4e-13 81.3 79 55.7
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 4.2e-13 79.7 78 57.7
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 3.5e-12 76.6 92 46.7
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.0e-11 75.1 71 57.7
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 5.6e-10 69.3 110 39.1
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 2.1e-09 67.4 63 60.3
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 2.8e-09 67.0 102 41.2
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.6e-09 66.6 43 79.1
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.8e-08 64.3 34 85.3
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 1.2e-07 61.6 40 77.5
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 5.8e-07 59.3 57 50.9
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.7e-06 57.8 38 73.7
Actinidia37470 Actinidia chinensis HOM05D003815 ORTHO05D004218 2.2e-06 57.4 35 77.1


User provided reference genes

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