Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.2e-228 796.2 411 100.0
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 5.4e-64 249.2 414 43.2
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 2.7e-47 193.7 404 37.4
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 1.3e-46 191.4 433 37.0
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 4.3e-45 186.4 363 39.1
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.8e-36 157.1 403 32.8
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.2e-34 151.8 342 35.7
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 3.4e-34 150.2 397 33.8
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.0e-30 138.7 421 30.9
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 2.3e-30 137.5 403 32.5
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 3.0e-30 137.1 394 31.7
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.0e-29 134.4 441 30.4
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 2.8e-28 130.6 346 37.0
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 4.8e-28 129.8 393 33.6
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.4e-27 128.3 259 39.4
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.7e-25 121.3 352 32.7
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 8.5e-25 119.0 400 30.2
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 8.5e-25 119.0 418 29.4
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 8.5e-25 119.0 303 33.7
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.5e-24 117.5 238 39.5
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 7.2e-24 115.9 391 29.7
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 7.2e-24 115.9 458 27.5
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 9.4e-24 115.5 256 37.5
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 9.4e-24 115.5 405 29.1
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.2e-23 115.2 247 38.5
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 2.1e-23 114.4 253 38.3
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 7.9e-23 112.5 385 30.1
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.8e-22 111.3 259 38.2
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 3.9e-22 110.2 395 30.6
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 6.7e-22 109.4 382 30.6
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 6.7e-22 109.4 250 37.6
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.7e-22 109.4 405 30.1
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 8.8e-22 109.0 408 30.9
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.5e-21 108.2 390 31.8
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.5e-21 108.2 392 30.4
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.4e-21 106.7 251 37.5
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 5.7e-21 106.3 393 31.8
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 7.4e-21 105.9 404 30.9
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 7.4e-21 105.9 293 31.7
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.2e-20 104.4 261 33.7
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.7e-20 103.6 405 29.9
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 3.7e-20 103.6 398 30.4
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 8.2e-20 102.4 246 35.8
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.1e-19 102.1 357 29.4
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 2.4e-19 100.9 434 29.3
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 4.1e-19 100.1 354 31.1
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 5.9e-18 96.3 422 27.7
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 1.7e-17 94.7 242 36.8
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 2.2e-17 94.4 343 29.4
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 5.0e-17 93.2 242 36.8
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 8.5e-17 92.4 197 38.1
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.1e-16 92.0 239 36.0
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 1.5e-16 91.7 147 38.1
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.9e-16 91.3 257 33.9
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.5e-16 90.9 317 32.2
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 5.5e-16 89.7 343 29.2
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 7.2e-16 89.4 243 37.4
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.2e-15 88.6 96 51.0
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 2.1e-15 87.8 308 30.5
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 2.1e-15 87.8 284 32.7
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 3.6e-15 87.0 291 31.6
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.0e-14 85.5 128 39.1
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.8e-14 84.7 382 28.5
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 8.8e-14 82.4 290 31.7
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.1e-13 82.0 267 31.5
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.1e-13 82.0 237 33.3
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 5.7e-13 79.7 411 28.7
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 8.2e-12 75.9 212 34.9
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.6e-10 71.6 93 43.0
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 2.5e-08 64.3 266 30.8
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 2.1e-07 61.2 194 32.0
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 8.0e-07 59.3 321 28.3
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 8.0e-07 59.3 321 28.3
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 8.0e-07 59.3 324 28.4
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 1.8e-06 58.2 84 40.5
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 4.0e-06 57.0 381 23.4


User provided reference genes

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