Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.9e-291 1005.0 464 100.0
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 3.1e-257 891.3 459 88.2
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 4.6e-253 877.5 445 87.9
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.7e-252 875.5 445 87.9
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.1e-251 872.8 445 87.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 3.1e-249 864.8 451 85.4
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 4.0e-249 864.4 451 85.1
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 5.3e-249 864.0 451 85.1
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 9.9e-248 859.8 447 86.6
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 4.9e-247 857.4 448 85.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 4.9e-247 857.4 459 84.3
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 8.4e-247 856.7 458 83.8
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.1e-246 856.3 492 79.7
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.1e-246 856.3 492 79.7
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.4e-246 855.9 445 85.2
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 7.1e-246 853.6 445 85.2
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 7.1e-246 853.6 444 85.1
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.2e-245 852.8 453 84.5
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.2e-245 852.8 451 84.9
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.1e-245 852.0 445 84.7
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 6.0e-245 850.5 444 85.6
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 5.1e-244 847.4 446 85.0
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 5.1e-244 847.4 445 85.8
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.9e-243 845.5 435 86.0
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 3.3e-243 844.7 433 87.1
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 4.3e-243 844.3 436 86.5
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 4.3e-243 844.3 443 85.3
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 7.4e-243 843.6 444 84.7
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 6.2e-242 840.5 434 86.2
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 6.2e-242 840.5 443 85.1
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 8.1e-242 840.1 439 85.2
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.8e-241 839.0 443 84.4
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 4.0e-241 837.8 435 86.4
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 5.3e-241 837.4 456 84.2
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.3e-241 837.4 439 85.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 6.9e-241 837.0 496 77.4
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 2.0e-240 835.5 435 85.3
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.8e-240 833.9 440 85.0
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 8.4e-239 830.1 437 84.9
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.1e-238 829.7 437 84.7
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.9e-238 828.9 434 84.8
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 5.5e-238 827.4 447 82.1
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 2.7e-237 825.1 437 84.7
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 6.0e-237 823.9 439 84.1
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.0e-236 823.2 443 83.1
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.8e-236 822.4 437 84.4
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.3e-236 822.0 439 83.8
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 3.0e-236 821.6 444 81.1
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 6.7e-236 820.5 487 79.3
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 8.7e-236 820.1 445 82.9
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.1e-235 819.7 441 82.8
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.5e-235 819.3 434 84.3
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.9e-235 818.9 442 82.6
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 2.8e-234 815.1 443 81.7
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.7e-234 814.7 469 79.5
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 4.8e-234 814.3 433 84.3
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 2.4e-233 812.0 433 83.6
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 4.0e-233 811.2 440 82.3
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 4.0e-233 811.2 432 83.8
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.2e-232 809.7 434 82.3
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.5e-232 809.3 432 83.3
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 2.0e-232 808.9 439 82.2
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 2.0e-232 808.9 439 82.2
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 3.4e-232 808.1 432 83.1
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.3e-231 806.2 450 79.8
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 2.9e-231 805.1 433 83.1
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 6.5e-231 803.9 448 80.4
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 6.5e-231 803.9 433 82.9
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 8.4e-231 803.5 461 79.8
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.9e-230 802.4 431 83.5
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 2.5e-230 802.0 432 82.9
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.5e-230 802.0 449 79.7
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.2e-229 799.7 432 82.9
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.2e-229 799.7 432 82.9
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 2.1e-229 798.9 447 81.9
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 4.6e-229 797.7 433 82.0
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 4.6e-229 797.7 442 80.3
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 7.9e-229 797.0 432 81.7
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.0e-228 796.6 436 80.7
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.0e-228 796.6 432 82.2
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 3.9e-228 794.7 428 83.4
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.5e-227 792.0 431 80.7
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 4.3e-227 791.2 440 82.3
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 3.7e-226 788.1 432 81.0
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.1e-225 786.6 453 77.7
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 2.9e-223 778.5 449 78.4
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 6.5e-223 777.3 434 78.3
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 8.2e-218 760.4 449 76.6
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 1.8e-217 759.2 436 78.4
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 3.0e-212 741.9 448 75.7
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 2.0e-211 739.2 434 77.0
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.0e-211 739.2 380 86.6
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.7e-210 736.1 380 86.3
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 7.4e-203 710.7 397 79.6
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 5.5e-198 694.5 434 71.4
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 9.4e-198 693.7 445 72.1
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 6.3e-194 681.0 433 72.5
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.8e-193 679.5 435 71.0
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 7.0e-193 677.6 421 71.7
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.3e-188 662.5 407 75.7
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 3.4e-179 632.1 434 66.1
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 9.2e-177 624.0 308 89.9
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 8.9e-172 607.4 327 83.5
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 9.8e-171 604.0 304 87.5
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 3.7e-162 575.5 447 61.5
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 2.5e-158 562.8 376 70.7
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 3.3e-158 562.4 455 60.2
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 6.4e-154 548.1 280 86.1
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 6.6e-135 485.0 283 77.0
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.0e-84 315.5 196 76.5
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 3.7e-77 293.1 159 83.6
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 7.2e-73 278.9 178 69.1
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 3.6e-72 276.6 412 43.2
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 2.6e-70 270.4 146 84.2
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.8e-68 264.2 132 87.1
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 9.5e-65 251.9 234 54.3
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 2.1e-64 250.8 133 82.7
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 3.6e-64 250.0 216 61.6
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 8.0e-64 248.8 136 81.6
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.0e-63 246.9 120 89.2
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.3e-50 204.1 124 73.4
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.7e-48 196.4 119 75.6
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 2.0e-46 191.0 249 48.2
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 6.6e-34 149.4 86 75.6
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.5e-25 121.7 97 59.8
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 5.6e-25 119.8 70 72.9
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 3.6e-24 117.1 62 82.3
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 3.1e-23 114.0 181 40.9
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.2e-20 104.0 105 52.4
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 7.1e-20 102.8 61 73.8
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 2.8e-16 90.9 68 61.8
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.3e-10 71.2 54 61.1
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 8.2e-08 62.8 43 62.8


User provided reference genes

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