Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 2.1e-87 325.9 192 100.0
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.4e-59 233.4 157 79.0
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 2.3e-57 226.1 157 77.1
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 2.6e-53 212.6 130 84.6
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 8.8e-49 197.6 144 73.6
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 8.8e-49 197.6 145 71.7
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.1e-48 197.2 134 76.1
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.5e-48 196.8 131 76.3
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 2.8e-47 192.6 143 72.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 3.7e-47 192.2 157 68.8
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.8e-47 191.8 156 68.6
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 6.3e-47 191.4 142 73.9
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 6.3e-47 191.4 142 73.9
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 8.2e-47 191.0 134 74.6
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.1e-46 190.7 157 66.9
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.1e-46 189.1 143 68.5
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 4.1e-46 188.7 146 70.5
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 5.3e-46 188.3 157 68.2
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 5.3e-46 188.3 154 67.5
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 9.1e-46 187.6 150 66.7
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 9.1e-46 187.6 156 66.7
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 9.1e-46 187.6 144 67.4
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 9.1e-46 187.6 144 67.4
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 1.2e-45 187.2 144 70.8
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 1.5e-45 186.8 146 70.5
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 2.6e-45 186.0 144 70.8
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 5.9e-45 184.9 143 67.1
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 5.9e-45 184.9 137 70.1
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.0e-44 184.1 138 73.2
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.3e-44 183.7 147 68.0
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.3e-44 183.7 135 71.9
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.7e-44 183.3 138 71.7
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.2e-44 183.0 157 66.2
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 2.2e-44 183.0 154 65.6
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.9e-44 182.6 154 64.3
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 2.9e-44 182.6 153 67.3
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 3.8e-44 182.2 145 67.6
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 6.5e-44 181.4 136 70.6
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 8.5e-44 181.0 144 68.8
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.1e-43 180.6 156 66.7
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.9e-43 179.9 144 66.7
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 1.9e-43 179.9 133 70.7
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 2.5e-43 179.5 156 65.4
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 2.5e-43 179.5 138 70.3
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 3.2e-43 179.1 156 64.7
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 7.2e-43 177.9 144 68.8
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 9.4e-43 177.6 139 67.6
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.2e-42 177.2 157 63.7
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.2e-42 177.2 157 62.4
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 1.6e-42 176.8 193 59.1
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.6e-42 176.8 136 68.4
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 4.7e-42 175.3 144 64.6
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 4.7e-42 175.3 153 62.7
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 6.1e-42 174.9 135 68.1
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 6.1e-42 174.9 131 72.5
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 1.0e-41 174.1 154 60.4
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 2.3e-41 172.9 164 59.8
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 3.0e-41 172.6 146 65.8
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 5.2e-41 171.8 144 65.3
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 6.7e-41 171.4 156 62.8
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 8.8e-41 171.0 154 63.0
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 1.1e-40 170.6 132 68.2
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 2.0e-40 169.9 138 65.9
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 4.4e-40 168.7 140 66.4
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 4.4e-40 168.7 157 63.7
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 1.7e-39 166.8 131 67.2
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.2e-39 166.4 130 66.9
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 2.8e-39 166.0 156 57.1
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 2.8e-39 166.0 136 64.0
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 2.8e-39 166.0 136 65.4
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 2.8e-39 166.0 137 66.4
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 6.3e-39 164.9 157 57.3
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-38 163.7 131 65.6
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 5.3e-38 161.8 138 61.6
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 5.3e-38 161.8 137 63.5
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 7.0e-38 161.4 137 63.5
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.2e-37 160.6 134 66.4
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.6e-37 159.5 125 64.8
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 7.7e-37 157.9 144 59.7
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.3e-36 157.1 144 59.7
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.8e-36 155.6 136 61.0
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 3.8e-36 155.6 131 63.4
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 5.0e-36 155.2 144 58.3
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 5.0e-36 155.2 144 58.3
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 6.5e-36 154.8 144 58.3
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 8.5e-36 154.5 138 57.2
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-35 154.1 144 57.6
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.1e-35 154.1 144 56.9
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.1e-35 154.1 138 60.9
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.5e-35 153.7 136 60.3
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.5e-35 153.7 138 58.7
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.9e-35 153.3 146 56.2
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 2.5e-35 152.9 145 57.9
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 2.5e-35 152.9 140 56.4
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 3.2e-35 152.5 187 55.6
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 7.2e-35 151.4 144 57.6
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 7.2e-35 151.4 144 57.6
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 7.2e-35 151.4 144 57.6
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 7.2e-35 151.4 144 57.6
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 7.2e-35 151.4 151 58.3
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-34 150.6 144 56.2
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 2.7e-34 149.4 129 62.8
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.1e-34 148.3 144 56.9
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.8e-33 146.7 138 60.9
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 2.3e-33 146.4 131 60.3
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.3e-33 146.4 135 62.2
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 5.2e-33 145.2 147 56.5
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 4.4e-32 142.1 145 57.9
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 4.4e-32 142.1 104 72.1
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 2.8e-31 139.4 135 57.0
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 4.5e-29 132.1 138 51.4
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.0e-28 128.6 135 56.3
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 6.5e-28 128.3 139 55.4
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 2.5e-27 126.3 156 47.4
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 2.5e-27 126.3 156 47.4
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-26 124.0 139 50.4
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.6e-26 123.6 156 46.2
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.6e-26 123.6 156 46.2
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.6e-26 123.6 156 46.2
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 2.7e-26 122.9 139 50.4
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 2.7e-26 122.9 139 50.4
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 2.7e-26 122.9 138 53.6
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 3.6e-26 122.5 139 49.6
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 4.7e-26 122.1 141 50.4
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 4.7e-26 122.1 156 46.2
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 6.1e-26 121.7 139 49.6
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 6.8e-25 118.2 131 49.6
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 3.4e-24 115.9 100 62.0
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 9.8e-24 114.4 145 51.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.3e-23 114.0 139 46.8
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.7e-23 113.6 146 50.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.2e-23 113.2 66 87.9
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 4.1e-22 109.0 114 54.4
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 8.6e-20 101.3 136 47.8
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 5.5e-19 98.6 141 44.7
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 5.5e-19 98.6 141 44.7
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 7.2e-19 98.2 89 61.8
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 8.6e-12 74.7 155 35.5
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 3.4e-08 62.8 69 56.5
AagrBONN_evm.TU.Sc2ySwM_117.2481 Anthoceros agrestis HOM05D005256 ORTHO05D006491 3.2e-06 56.2 98 33.7


User provided reference genes

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