Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 7.9e-158 560.5 295 100.0
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 8.6e-96 354.4 295 65.8
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 2.1e-78 296.6 264 57.2
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 3.3e-71 272.7 247 59.1
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 3.3e-71 272.7 247 59.1
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 1.4e-66 257.3 300 52.0
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 8.1e-62 241.5 300 50.3
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 4.0e-61 239.2 302 47.7
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 6.9e-61 238.4 299 48.5
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 4.9e-59 232.3 296 49.3
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 4.2e-58 229.2 248 53.2
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 8.7e-56 221.5 301 47.5
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 1.1e-55 221.1 245 51.4
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 3.3e-55 219.5 299 45.2
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 1.3e-54 217.6 258 48.4
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.3e-54 217.6 302 45.0
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 4.0e-53 212.6 297 44.8
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 2.2e-51 206.8 296 43.9
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 2.9e-51 206.5 296 45.3
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 1.1e-50 204.5 279 47.7
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 1.4e-50 204.1 218 51.8
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 4.2e-50 202.6 269 46.1
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 4.6e-49 199.1 286 42.0
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 4.6e-49 199.1 276 46.4
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 1.1e-47 194.5 232 46.6
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 1.1e-47 194.5 244 43.9
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 2.5e-47 193.4 295 42.4
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 8.2e-46 188.3 290 41.4
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 1.8e-45 187.2 293 40.3
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 1.8e-45 187.2 293 40.3
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 4.1e-45 186.0 246 41.9
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 9.0e-45 184.9 249 41.4
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 1.5e-44 184.1 295 38.3
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 3.4e-44 183.0 246 41.1
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 1.0e-43 181.4 257 42.8
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 2.2e-43 180.3 252 43.7
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 2.9e-43 179.9 251 40.2
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 6.5e-43 178.7 286 40.6
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 8.5e-43 178.3 199 51.8
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 8.5e-43 178.3 289 39.8
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 8.5e-43 178.3 301 41.5
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 1.4e-42 177.6 284 40.1
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 4.2e-42 176.0 256 43.0
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 4.2e-42 176.0 291 40.2
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 2.1e-41 173.7 253 40.3
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.1e-41 173.7 251 42.2
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 2.7e-41 173.3 235 46.4
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 2.7e-41 173.3 248 41.1
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 3.6e-41 172.9 295 38.6
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 4.6e-41 172.6 300 39.3
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 1.4e-40 171.0 298 40.3
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 3.0e-40 169.9 299 40.1
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 9.7e-39 164.9 267 39.3
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 9.7e-39 164.9 293 39.9
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 1.3e-38 164.5 236 42.4
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 2.2e-38 163.7 248 37.5
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 3.7e-38 162.9 243 42.0
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 6.3e-38 162.2 260 38.8
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 6.3e-38 162.2 291 38.1
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 1.4e-37 161.0 179 50.8
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 1.8e-37 160.6 258 38.8
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 5.3e-37 159.1 197 47.2
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 5.3e-37 159.1 248 39.5
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 2.6e-36 156.8 266 37.6
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 5.9e-36 155.6 287 36.9
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 2.2e-35 153.7 255 39.2
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 2.2e-35 153.7 298 38.6
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 2.9e-35 153.3 251 39.4
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 6.5e-35 152.1 268 36.2
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 1.4e-34 151.0 236 39.8
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 1.4e-34 151.0 295 37.3
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 1.9e-34 150.6 252 40.5
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 2.5e-34 150.2 181 45.3
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 9.4e-34 148.3 241 40.2
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 1.6e-33 147.5 176 47.7
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 2.7e-33 146.7 283 36.4
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 2.7e-33 146.7 239 39.7
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 8.2e-30 135.2 247 35.6
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 1.1e-29 134.8 288 33.7
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 1.4e-29 134.4 231 37.7
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 3.1e-29 133.3 231 38.1
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 4.1e-29 132.9 210 40.0
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 1.2e-28 131.3 231 37.7
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 2.0e-28 130.6 229 38.0
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 2.6e-28 130.2 287 33.8
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 5.9e-28 129.0 213 40.4
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 5.9e-28 129.0 184 44.0
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 1.1e-26 124.8 298 32.2
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 1.6e-25 120.9 219 35.6
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 6.3e-22 109.0 152 41.4
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 5.3e-21 105.9 214 36.4
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 6.1e-17 92.4 280 30.0
Os02g0305600 Oryza sativa ssp. japonica HOM05D007447 ORTHO05D009372 2.8e-14 83.6 322 25.5
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 1.4e-13 81.3 118 37.3
ATR0730G049 Amborella trichopoda HOM05D007447 ORTHO05D009372 1.3e-11 74.7 215 28.8
Zm00001eb203200 Zea mays HOM05D007447 ORTHO05D009372 1.3e-11 74.7 312 25.6
Gohir.A01G124600 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.6e-09 66.6 68 51.5
Gohir.A01G131222 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.6e-09 66.6 68 51.5
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 4.7e-09 66.2 82 41.5
Gohir.A02G158500 Gossypium hirsutum HOM05D007447 ORTHO05D009372 8.0e-09 65.5 68 50.0
AUR62031072 Chenopodium quinoa HOM05D007447 ORTHO05D009372 1.4e-08 64.7 206 27.2
MELO3C027350.2 Cucumis melo HOM05D007447 ORTHO05D009372 2.8e-06 57.0 95 36.8
HPP92_005282 Vanilla planifolia HOM05D007447 ORTHO05D009372 4.8e-06 56.2 245 25.7
CDE02G3722 Ceratophyllum demersum HOM05D003490 ORTHO05D004835 6.3e-06 55.8 160 28.1


User provided reference genes

Program Settings