Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 2.6e-91 339.0 208 100.0
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 6.1e-56 221.5 207 72.0
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 6.4e-37 158.3 180 58.9
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.1e-36 154.8 181 59.1
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 8.6e-34 147.9 179 58.7
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 3.8e-21 105.9 173 45.1
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 7.3e-17 91.7 116 57.8
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.1e-16 90.1 173 43.4
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.8e-15 87.0 120 40.8
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 3.1e-15 86.3 184 42.9
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 3.1e-15 86.3 173 43.9
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 9.0e-15 84.7 171 42.1
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 3.4e-14 82.8 183 41.0
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.7e-13 80.5 175 41.7
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 2.2e-13 80.1 131 32.1
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 2.2e-13 80.1 143 45.5
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 2.9e-13 79.7 185 35.1
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 6.4e-13 78.6 179 40.2
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.4e-13 78.6 123 30.9
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.4e-13 78.6 123 30.9
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 6.4e-13 78.6 122 50.8
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 1.1e-12 77.8 91 59.3
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.4e-12 77.4 121 33.1
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.2e-12 76.3 156 44.2
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 3.2e-12 76.3 110 48.2
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 4.2e-12 75.9 136 48.5
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 9.3e-12 74.7 149 45.0
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 9.3e-12 74.7 117 48.7
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.2e-11 74.3 130 47.7
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.1e-11 73.6 162 45.1
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.1e-11 73.6 107 50.5
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 2.7e-11 73.2 154 29.2
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 2.7e-11 73.2 168 35.1
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 3.5e-11 72.8 117 51.3
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 3.5e-11 72.8 106 37.7
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 3.5e-11 72.8 124 41.1
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 6.0e-11 72.0 117 48.7
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 6.0e-11 72.0 116 49.1
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 6.0e-11 72.0 156 31.4
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 6.0e-11 72.0 61 52.5
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 7.9e-11 71.6 107 51.4
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.0e-10 71.2 118 50.0
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.0e-10 71.2 107 51.4
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.0e-10 71.2 107 51.4
Gohir.D05G225700 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.0e-10 71.2 112 50.0
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.3e-10 70.9 161 38.5
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.8e-10 70.5 161 42.2
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.8e-10 70.5 107 50.5
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 2.3e-10 70.1 58 55.2
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 3.9e-10 69.3 113 50.4
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 5.1e-10 68.9 100 51.0
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.1e-10 68.9 107 50.5
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 5.1e-10 68.9 125 33.6
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 5.1e-10 68.9 139 43.9
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.7e-10 68.6 161 36.6
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.1e-09 67.8 191 37.7
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.5e-09 67.4 100 56.0
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 2.5e-09 66.6 98 53.1
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 2.5e-09 66.6 99 52.5
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 2.5e-09 66.6 90 55.6
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 2.5e-09 66.6 117 33.3
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 2.5e-09 66.6 117 49.6
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 3.3e-09 66.2 150 45.3
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.3e-09 66.2 191 35.1
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 3.3e-09 66.2 128 43.0
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.3e-09 65.9 136 41.9
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.3e-09 65.9 129 44.2
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 7.4e-09 65.1 134 40.3
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 7.4e-09 65.1 136 41.9
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 7.4e-09 65.1 129 44.2
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 7.4e-09 65.1 128 43.0
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 7.4e-09 65.1 121 46.3
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 1.3e-08 64.3 167 35.9
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.3e-08 64.3 148 36.5
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.6e-08 63.9 162 40.1
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 2.1e-08 63.5 111 45.0
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 2.1e-08 63.5 115 44.3
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 2.8e-08 63.2 95 55.8
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 4.8e-08 62.4 125 29.6
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 4.8e-08 62.4 113 47.8
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 4.8e-08 62.4 92 53.3
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 4.8e-08 62.4 133 42.1
FAN08G2352 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.2e-08 62.0 96 52.1
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 8.1e-08 61.6 103 41.7
CANSAT25G2000 Cannabis sativa HOM05D004728 ORTHO05D002375 1.1e-07 61.2 107 50.5
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 1.4e-07 60.8 138 40.6
Gohir.A05G223000 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.8e-07 60.5 125 44.0
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.8e-07 60.5 97 48.5
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 2.4e-07 60.1 177 36.7
Thecc.08G100800 Theobroma cacao HOM05D004728 ORTHO05D002375 2.4e-07 60.1 102 49.0
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 4.0e-07 59.3 167 37.1
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 6.9e-07 58.5 85 56.5
FAN13G0425 Fragaria x ananassa HOM05D004728 ORTHO05D002375 9.0e-07 58.2 137 38.7
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.5e-06 57.4 127 44.9
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.5e-06 57.4 171 33.9
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.5e-06 57.4 158 36.7
Nitab4.5_0007108g0040 Nicotiana tabacum HOM05D021150 ORTHO05D002375 1.5e-06 57.4 96 52.1
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 1.5e-06 57.4 90 54.4
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.5e-06 57.4 97 51.5
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.6e-06 56.6 106 46.2
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 2.6e-06 56.6 111 27.9
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 3.4e-06 56.2 117 31.6
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 4.5e-06 55.8 167 34.1
Prupe.6G194200 Prunus persica HOM05D004728 ORTHO05D002375 4.5e-06 55.8 102 48.0
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 4.5e-06 55.8 99 43.4
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 5.8e-06 55.5 106 49.1
Lalb_Chr17g0344311 Lupinus albus HOM05D012119 ORTHO05D002375 7.6e-06 55.1 61 42.6
MD15G1317500 Malus domestica HOM05D004728 ORTHO05D002375 7.6e-06 55.1 62 43.5
PSO541G3905 Papaver somniferum HOM05D015253 ORTHO05D023059 7.6e-06 55.1 48 45.8
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 9.9e-06 54.7 157 38.2
Sopen04g029740 Solanum pennellii HOM05D021150 ORTHO05D002375 9.9e-06 54.7 152 36.8


User provided reference genes

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