Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 3.7e-146 521.9 352 100.0
Migut.H01490 Erythranthe guttata HOM05D007781 ORTHO05D009769 1.7e-58 230.7 260 68.5
SGA_v2.0_scaffold49G18292 Striga asiatica HOM05D007781 ORTHO05D009769 1.8e-36 157.5 257 57.6
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 7.0e-28 129.0 218 53.2
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 9.8e-22 108.6 187 54.5
unitig_744.g24534 Utricularia gibba HOM05D007781 ORTHO05D009769 7.0e-20 102.4 377 44.0
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.6e-19 101.3 209 48.3
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 8.6e-18 95.5 143 62.2
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 8.6e-18 95.5 173 52.6
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 3.3e-17 93.6 116 67.2
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 1.2e-16 91.7 109 68.8
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 6.2e-16 89.4 172 52.3
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 6.2e-16 89.4 101 70.3
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 8.1e-16 89.0 88 75.0
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 2.3e-15 87.4 108 66.7
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 3.1e-15 87.0 94 73.4
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 3.1e-15 87.0 185 49.2
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 5.2e-15 86.3 109 68.8
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 5.2e-15 86.3 115 67.0
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 5.2e-15 86.3 93 71.0
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 1.2e-14 85.1 104 70.2
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 2.6e-14 84.0 88 72.7
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 2.6e-14 84.0 88 72.7
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 2.6e-14 84.0 101 70.3
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 2.6e-14 84.0 106 68.9
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 3.4e-14 83.6 140 57.1
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 4.4e-14 83.2 87 69.0
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 7.5e-14 82.4 93 72.0
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 9.8e-14 82.0 83 78.3
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 9.8e-14 82.0 115 64.3
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 1.7e-13 81.3 92 71.7
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 1.7e-13 81.3 116 65.5
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 1.7e-13 81.3 186 45.7
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 1.7e-13 81.3 121 61.2
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 2.9e-13 80.5 104 67.3
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 3.7e-13 80.1 88 75.0
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 3.7e-13 80.1 88 75.0
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 3.7e-13 80.1 102 68.6
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 3.7e-13 80.1 170 52.4
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 4.9e-13 79.7 87 75.9
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 4.9e-13 79.7 104 67.3
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 1.1e-12 78.6 107 63.6
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 1.4e-12 78.2 105 65.7
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 2.4e-12 77.4 82 74.4
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 4.1e-12 76.6 88 71.6
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 7.1e-12 75.9 93 73.1
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 9.2e-12 75.5 105 64.8
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 1.2e-11 75.1 82 72.0
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 1.6e-11 74.7 83 74.7
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 4.6e-11 73.2 134 53.0
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 3.0e-10 70.5 86 70.9
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 3.9e-10 70.1 86 70.9
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 5.1e-10 69.7 88 68.2
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 5.1e-10 69.7 124 58.1
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 6.6e-10 69.3 115 59.1
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 6.6e-10 69.3 88 68.2
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 8.6e-10 68.9 115 59.1
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 1.5e-09 68.2 162 49.4
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 1.5e-09 68.2 97 67.0
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 1.9e-09 67.8 127 57.5
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 2.5e-09 67.4 86 70.9
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 2.5e-09 67.4 86 70.9
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 2.5e-09 67.4 85 71.8
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.6e-09 66.2 107 60.7
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 5.6e-09 66.2 100 63.0
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 5.6e-09 66.2 97 64.9
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 5.6e-09 66.2 154 48.1
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 7.3e-09 65.9 85 71.8
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 9.5e-09 65.5 138 50.7
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 1.2e-08 65.1 86 67.4
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 1.6e-08 64.7 85 65.9
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 2.1e-08 64.3 71 46.5
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 6.2e-08 62.8 85 64.7
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 1.1e-07 62.0 86 68.6
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 1.1e-07 62.0 86 68.6
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 1.8e-07 61.2 100 63.0
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 4.0e-07 60.1 79 69.6
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 4.0e-07 60.1 131 51.9
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 1.2e-06 58.5 71 76.1
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 2.6e-06 57.4 38 60.5
SHI01775 Sapria himalayana HOM05D007781 ORTHO05D009769 2.6e-06 57.4 173 42.8
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 5.8e-06 56.2 50 54.0


User provided reference genes

Program Settings