Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14654 Avicennia marina HOM05D000067 ORTHO05D023797 2.3e-111 405.6 206 100.0
SGA_v2.0_scaffold159G37710 Striga asiatica HOM05D000067 ORTHO05D001807 1.2e-16 90.9 172 37.2
Migut.H01541 Erythranthe guttata HOM05D000067 ORTHO05D001807 2.4e-15 86.7 163 37.4
Migut.H01545 Erythranthe guttata HOM05D000067 ORTHO05D001807 4.2e-12 75.9 95 46.3
Migut.H01543 Erythranthe guttata HOM05D000067 ORTHO05D001807 5.4e-12 75.5 91 48.4
Oeu050565.1 Olea europaea HOM05D000067 ORTHO05D001807 5.4e-12 75.5 118 42.4
Oeu050567.1 Olea europaea HOM05D000067 ORTHO05D001807 5.4e-12 75.5 91 47.3
TWI38G1089 Tripterygium wilfordii HOM05D000067 ORTHO05D001807 5.4e-12 75.5 100 44.0
Oeu050566.1 Olea europaea HOM05D000067 ORTHO05D001807 9.2e-12 74.7 133 37.6
Hma1.2p1_0809F.1_g221790 Hydrangea macrophylla HOM05D000067 ORTHO05D001807 3.5e-11 72.8 90 44.4
Oeu050540.2 Olea europaea HOM05D000067 ORTHO05D001807 7.8e-11 71.6 88 46.6
Gohir.D10G017700 Gossypium hirsutum HOM05D000067 ORTHO05D001807 5.1e-10 68.9 93 40.9
Gorai.011G019700 Gossypium raimondii HOM05D000067 ORTHO05D001807 5.1e-10 68.9 93 40.9
Gohir.A10G017500 Gossypium hirsutum HOM05D000067 ORTHO05D001807 6.6e-10 68.6 93 41.9
Oeu050556.1 Olea europaea HOM05D000067 ORTHO05D001807 6.6e-10 68.6 88 45.5
QL05p077515 Quercus lobata HOM05D000067 ORTHO05D001807 6.6e-10 68.6 90 43.3
CiPaw.09G153500 Carya illinoinensis HOM05D000067 ORTHO05D001807 8.7e-10 68.2 93 39.8
Oeu050569.1 Olea europaea HOM05D000067 ORTHO05D001807 8.7e-10 68.2 88 44.3
CiPaw.09G152900 Carya illinoinensis HOM05D000067 ORTHO05D001807 1.1e-09 67.8 93 39.8
MELO3C035526.2 Cucumis melo HOM05D000067 ORTHO05D001807 1.9e-09 67.0 97 37.1
CsaV3_1G011410 Cucumis sativus L. HOM05D000067 ORTHO05D001807 1.9e-09 67.0 68 50.0
Gohir.D10G017650 Gossypium hirsutum HOM05D000067 ORTHO05D001807 1.9e-09 67.0 90 41.1
Sed0025437 Sechium edule HOM05D000067 ORTHO05D001807 2.5e-09 66.6 74 48.6
CiPaw.09G153200 Carya illinoinensis HOM05D000067 ORTHO05D001807 3.3e-09 66.2 100 36.0
AUR62014632 Chenopodium quinoa HOM05D000067 ORTHO05D001807 3.3e-09 66.2 109 36.7
Dinv17856 Davidia involucrata HOM05D000067 ORTHO05D001807 3.3e-09 66.2 93 41.9
Sed0007829 Sechium edule HOM05D000067 ORTHO05D001807 3.3e-09 66.2 90 44.4
CiPaw.09G153100 Carya illinoinensis HOM05D000067 ORTHO05D001807 5.6e-09 65.5 93 37.6
CiPaw.09G153400 Carya illinoinensis HOM05D000067 ORTHO05D001807 5.6e-09 65.5 93 38.7
Duzib235G0134 Durio zibethinus HOM05D000067 ORTHO05D001807 5.6e-09 65.5 94 39.4
Thecc.06G206700 Theobroma cacao HOM05D000067 ORTHO05D001807 5.6e-09 65.5 94 41.5
Thecc.06G207000 Theobroma cacao HOM05D000067 ORTHO05D001807 5.6e-09 65.5 94 40.4
CiPaw.07G072900 Carya illinoinensis HOM05D000067 ORTHO05D001807 7.3e-09 65.1 94 40.4
CiPaw.07G073000 Carya illinoinensis HOM05D000067 ORTHO05D001807 7.3e-09 65.1 94 40.4
Oeu050553.1 Olea europaea HOM05D000067 ORTHO05D001807 9.6e-09 64.7 79 44.3
Sed0003991 Sechium edule HOM05D000067 ORTHO05D001807 9.6e-09 64.7 88 43.2
Manes.16G016100 Manihot esculenta HOM05D000067 ORTHO05D001807 1.6e-08 63.9 81 46.9
Manes.16G016300 Manihot esculenta HOM05D000067 ORTHO05D001807 1.6e-08 63.9 85 42.4
Cc02_g11870 Coffea canephora HOM05D000067 ORTHO05D001807 2.1e-08 63.5 164 30.5
MELO3C002516.2 Cucumis melo HOM05D000067 ORTHO05D001807 2.1e-08 63.5 68 48.5
Nn7g36845 Nelumbo nucifera HOM05D000067 ORTHO05D001807 2.1e-08 63.5 110 41.8
Thecc.06G206600 Theobroma cacao HOM05D000067 ORTHO05D001807 2.1e-08 63.5 94 40.4
TAR629G3492 Trochodendron aralioides HOM05D000067 ORTHO05D001807 2.1e-08 63.5 68 50.0
GSVIVG01005217001 Vitis vinifera HOM05D000067 ORTHO05D001807 2.1e-08 63.5 98 37.8
ClCG03G005200 Citrullus lanatus HOM05D000067 ORTHO05D001807 3.6e-08 62.8 89 38.2
Manes.16G016200 Manihot esculenta HOM05D000067 ORTHO05D001807 3.6e-08 62.8 81 43.2
TWI38G0514 Tripterygium wilfordii HOM05D000067 ORTHO05D001807 3.6e-08 62.8 68 47.1
Haze_06660 Corylus avellana HOM05D000067 ORTHO05D001807 4.7e-08 62.4 77 45.5
Lj1A1220T17 Lonicera japonica HOM05D000067 ORTHO05D001807 4.7e-08 62.4 70 48.6
Manes.17G030610 Manihot esculenta HOM05D000067 ORTHO05D001807 4.7e-08 62.4 87 39.1
VMungo0540G1501 Vigna mungo HOM05D000067 ORTHO05D001807 4.7e-08 62.4 93 35.5
GSVIVG01005272001 Vitis vinifera HOM05D000067 ORTHO05D001807 4.7e-08 62.4 99 37.4
Duzib192G1015 Durio zibethinus HOM05D000067 ORTHO05D001807 6.2e-08 62.0 95 38.9
PGSC0003DMG401011252 Solanum tuberosum HOM05D000067 ORTHO05D001807 6.2e-08 62.0 61 47.5
PGSC0003DMG402011252 Solanum tuberosum HOM05D000067 ORTHO05D001807 6.2e-08 62.0 60 48.3
TAR627G0794 Trochodendron aralioides HOM05D000067 ORTHO05D001807 6.2e-08 62.0 66 48.5
CsaV3_1G011400 Cucumis sativus L. HOM05D000067 ORTHO05D001807 8.1e-08 61.6 90 41.1
GSVIVG01006467001 Vitis vinifera HOM05D000067 ORTHO05D001807 8.1e-08 61.6 91 39.6
EL10As6g23679 Beta vulgaris HOM05D000067 ORTHO05D001807 1.1e-07 61.2 93 39.8
Haze_06659 Corylus avellana HOM05D000067 ORTHO05D001807 1.1e-07 61.2 92 41.3
PGR042G0293 Punica granatum HOM05D000067 ORTHO05D001807 1.1e-07 61.2 79 41.8
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.4e-07 60.8 65 49.2
Solyc10g005390.4 Solanum lycopersicum HOM05D000067 ORTHO05D001807 1.4e-07 60.8 61 44.3
Solyc10g005410.4 Solanum lycopersicum HOM05D000067 ORTHO05D001807 1.4e-07 60.8 61 44.3
Cfa000281 Carpinus fangiana HOM05D000067 ORTHO05D001807 1.8e-07 60.5 89 40.4
AUR62014633 Chenopodium quinoa HOM05D000067 ORTHO05D001807 1.8e-07 60.5 90 37.8
Lj6A301T10 Lonicera japonica HOM05D000067 ORTHO05D001807 1.8e-07 60.5 70 47.1
Lj6A313T17 Lonicera japonica HOM05D000067 ORTHO05D001807 1.8e-07 60.5 70 47.1
Psat1g210800 Pisum sativum HOM05D000067 ORTHO05D001807 1.8e-07 60.5 73 43.8
CSS0012706 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D001807 2.4e-07 60.1 112 35.7
CSS0015676 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D001807 2.4e-07 60.1 96 36.5
Cfa000282 Carpinus fangiana HOM05D000067 ORTHO05D001807 2.4e-07 60.1 92 41.3
AUR62012567 Chenopodium quinoa HOM05D000067 ORTHO05D001807 2.4e-07 60.1 79 41.8
ClCG03G005230 Citrullus lanatus HOM05D000067 ORTHO05D001807 2.4e-07 60.1 80 45.0
Haze_00599 Corylus avellana HOM05D000067 ORTHO05D000280 2.4e-07 60.1 72 40.3
RcHm_v2.0_Chr5g0037511 Rosa chinensis HOM05D000067 ORTHO05D001807 2.4e-07 60.1 99 37.4
EL10As6g23677 Beta vulgaris HOM05D000067 ORTHO05D001807 3.1e-07 59.7 93 38.7
CSS0000049 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D001807 3.1e-07 59.7 90 37.8
CSS0000223 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D001807 3.1e-07 59.7 90 37.8
Medtr2g010960 Medicago truncatula HOM05D000067 ORTHO05D001807 3.1e-07 59.7 79 41.8
Potri.011G032300 Populus trichocarpa HOM05D000067 ORTHO05D001807 3.1e-07 59.7 93 39.8
CiPaw.11G180800 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.0e-07 59.3 67 49.3
CiPaw.11G180900 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.0e-07 59.3 67 49.3
DCAR_032119 Daucus carota HOM05D000067 ORTHO05D000280 4.0e-07 59.3 88 37.5
PGR042G0552 Punica granatum HOM05D000067 ORTHO05D001807 4.0e-07 59.3 76 40.8
PGR042G0981 Punica granatum HOM05D000067 ORTHO05D001807 4.0e-07 59.3 79 40.5
QL05p077442 Quercus lobata HOM05D000067 ORTHO05D001807 4.0e-07 59.3 69 44.9
Hund27783 Selenicereus undatus HOM05D000067 ORTHO05D000097 4.0e-07 59.3 67 40.3
Hund27784 Selenicereus undatus HOM05D000067 ORTHO05D000097 4.0e-07 59.3 67 40.3
TPR.G36191 Trifolium pratense HOM05D000067 ORTHO05D001807 4.0e-07 59.3 86 39.5
GSVIVG01006465001 Vitis vinifera HOM05D000067 ORTHO05D001807 4.0e-07 59.3 92 40.2
QL05p078196 Quercus lobata HOM05D000067 ORTHO05D001807 5.3e-07 58.9 168 30.4
RcHm_v2.0_Chr5g0004711 Rosa chinensis HOM05D000067 ORTHO05D001807 5.3e-07 58.9 105 33.3
TAR627G1062 Trochodendron aralioides HOM05D000067 ORTHO05D001807 5.3e-07 58.9 66 47.0
ATR1070G001 Amborella trichopoda HOM05D000067 ORTHO05D000097 6.9e-07 58.5 107 33.6
CSS0013839 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D001807 6.9e-07 58.5 121 33.9
QL05p077679 Quercus lobata HOM05D000067 ORTHO05D001807 6.9e-07 58.5 144 32.6
TPR.G13922 Trifolium pratense HOM05D000067 ORTHO05D001807 6.9e-07 58.5 129 31.0
TPR.G33797 Trifolium pratense HOM05D000067 ORTHO05D001807 6.9e-07 58.5 68 44.1
GSVIVG01007468001 Vitis vinifera HOM05D000067 ORTHO05D001807 6.9e-07 58.5 88 37.5
Carub.0004s0348 Capsella rubella HOM05D000067 ORTHO05D000280 9.0e-07 58.2 93 31.2
DCAR_031916 Daucus carota HOM05D000067 ORTHO05D000097 9.0e-07 58.2 85 43.5
Lj6g0011316 Lotus japonicus HOM05D000067 ORTHO05D001807 9.0e-07 58.2 68 39.7
Oeu050547.1 Olea europaea HOM05D000067 ORTHO05D001807 9.0e-07 58.2 59 47.5
GSVIVG01006466001 Vitis vinifera HOM05D000067 ORTHO05D001807 9.0e-07 58.2 88 38.6
Aqoxy151s002 Aquilegia oxysepala HOM05D000067 ORTHO05D000097 1.2e-06 57.8 95 36.8
Aqoxy1G03774 Aquilegia oxysepala HOM05D000067 ORTHO05D000097 1.2e-06 57.8 95 36.8
CAN.G1174.1 Capsicum annuum HOM05D000067 ORTHO05D001807 1.2e-06 57.8 62 45.2
CAN.G132.22 Capsicum annuum HOM05D000067 ORTHO05D001807 1.2e-06 57.8 62 45.2
CiPaw.09G153300 Carya illinoinensis HOM05D000067 ORTHO05D001807 1.2e-06 57.8 92 37.0
AUR62014629 Chenopodium quinoa HOM05D000067 ORTHO05D001807 1.2e-06 57.8 93 39.8
AUR62044185 Chenopodium quinoa HOM05D000067 ORTHO05D001807 1.2e-06 57.8 93 39.8
Duzib213G0094 Durio zibethinus HOM05D000067 ORTHO05D000097 1.2e-06 57.8 92 38.0
Rhsim03G0006700 Rhododendron simsii HOM05D000067 ORTHO05D000280 1.2e-06 57.8 67 47.8
VMungo0251G2114 Vigna mungo HOM05D000067 ORTHO05D001807 1.2e-06 57.8 103 32.0
DCAR_024753 Daucus carota HOM05D000067 ORTHO05D001807 1.5e-06 57.4 67 46.3
GSVIVG01002718001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.5e-06 57.4 75 37.3
CSS0044956 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 2.0e-06 57.0 67 44.8
Cfa015891 Carpinus fangiana HOM05D000067 ORTHO05D000280 2.0e-06 57.0 68 39.7
Ciclev10014632m.g Citrus clementina HOM05D000067 ORTHO05D001807 2.0e-06 57.0 89 38.2
Oeu007648.1 Olea europaea HOM05D000067 ORTHO05D000097 2.0e-06 57.0 86 39.5
Oeu007650.1 Olea europaea HOM05D000067 ORTHO05D000097 2.0e-06 57.0 87 37.9
GSVIVG01036374001 Vitis vinifera HOM05D000067 ORTHO05D000097 2.0e-06 57.0 94 37.2
CiPaw.11G181800 Carya illinoinensis HOM05D000067 ORTHO05D000097 2.6e-06 56.6 99 35.4
AUR62034213 Chenopodium quinoa HOM05D000067 ORTHO05D000097 2.6e-06 56.6 79 36.7
MBI18_g38011_MAGBIO Magnolia biondii HOM05D032938 ORTHO05D023797 2.6e-06 56.6 68 39.7
RcHm_v2.0_Chr5g0004801 Rosa chinensis HOM05D000067 ORTHO05D001807 2.6e-06 56.6 118 33.1
Sed0011923 Sechium edule HOM05D000067 ORTHO05D001807 2.6e-06 56.6 70 45.7
GSVIVG01005218001 Vitis vinifera HOM05D000067 ORTHO05D001807 2.6e-06 56.6 92 39.1
GSVIVG01005221001 Vitis vinifera HOM05D000067 ORTHO05D001807 2.6e-06 56.6 92 39.1
GSVIVG01006589001 Vitis vinifera HOM05D000067 ORTHO05D001807 2.6e-06 56.6 92 39.1
GSVIVG01006591001 Vitis vinifera HOM05D000067 ORTHO05D001807 2.6e-06 56.6 92 39.1
ATR0007G001 Amborella trichopoda HOM05D000067 ORTHO05D000097 3.4e-06 56.2 107 32.7
AagrBONN_evm.TU.Sc2ySwM_368.23 Anthoceros agrestis HOM05D000596 ORTHO05D001497 3.4e-06 56.2 95 35.8
Aqoxy1G04168 Aquilegia oxysepala HOM05D000067 ORTHO05D000097 3.4e-06 56.2 86 37.2
arahy.Tifrunner.gnm1.ann1.IF1UXG Arachis hypogaea HOM05D000067 ORTHO05D001807 3.4e-06 56.2 98 38.8
Phvul.006G195600 Phaseolus vulgaris HOM05D000067 ORTHO05D001807 3.4e-06 56.2 91 35.2
Prupe.4G030400 Prunus persica HOM05D000067 ORTHO05D001807 3.4e-06 56.2 87 39.1
Rhsim12G0120800 Rhododendron simsii HOM05D000067 ORTHO05D000097 3.4e-06 56.2 64 40.6
RcHm_v2.0_Chr7g0212441 Rosa chinensis HOM05D000067 ORTHO05D000097 3.4e-06 56.2 112 32.1
vmacro11783 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 3.4e-06 56.2 83 38.6
AUR62012569 Chenopodium quinoa HOM05D000067 ORTHO05D001807 4.4e-06 55.8 99 34.3
AUR62029253 Chenopodium quinoa HOM05D000067 ORTHO05D000097 4.4e-06 55.8 68 42.6
MELO3C002517.2 Cucumis melo HOM05D000067 ORTHO05D001807 4.4e-06 55.8 66 48.5
CsaV3_2G017930 Cucumis sativus L. HOM05D000067 ORTHO05D000280 4.4e-06 55.8 73 38.4
DCAR_024754 Daucus carota HOM05D000067 ORTHO05D001807 4.4e-06 55.8 82 43.9
MD05G1335100 Malus domestica HOM05D000067 ORTHO05D001807 4.4e-06 55.8 88 39.8
Solyc05g026590.2 Solanum lycopersicum HOM05D000067 ORTHO05D001807 4.4e-06 55.8 61 42.6
Sopen05g024370 Solanum pennellii HOM05D000067 ORTHO05D001807 4.4e-06 55.8 61 42.6
PGSC0003DMG400011775 Solanum tuberosum HOM05D000067 ORTHO05D000097 4.4e-06 55.8 96 31.2
GSVIVG01005268001 Vitis vinifera HOM05D000067 ORTHO05D001807 4.4e-06 55.8 90 38.9
Ah.06g183360 Amaranthus hybridus HOM05D000067 ORTHO05D000097 5.8e-06 55.5 102 34.3
Aqoxy4G01082 Aquilegia oxysepala HOM05D000067 ORTHO05D000097 5.8e-06 55.5 88 39.8
CANSAT39G0001 Cannabis sativa HOM05D000067 ORTHO05D000280 5.8e-06 55.5 119 33.6
Gohir.D04G146600 Gossypium hirsutum HOM05D000067 ORTHO05D000280 5.8e-06 55.5 88 40.9
Lsat_1_v5_gn_4_58221 Lactuca sativa HOM05D000067 ORTHO05D001807 5.8e-06 55.5 79 34.2
Lj4g0026784 Lotus japonicus HOM05D000067 ORTHO05D000280 5.8e-06 55.5 93 35.5
PGR042G3649 Punica granatum HOM05D000067 ORTHO05D000280 5.8e-06 55.5 85 37.6
Rhsim12G0120300 Rhododendron simsii HOM05D000067 ORTHO05D000097 5.8e-06 55.5 64 39.1
RhsimUnG0193200 Rhododendron simsii HOM05D000067 ORTHO05D000097 5.8e-06 55.5 93 33.3
SalBow8G4960 Salvia bowleyana HOM05D000067 ORTHO05D001807 5.8e-06 55.5 70 45.7
TWI15G0017 Tripterygium wilfordii HOM05D000067 ORTHO05D000280 5.8e-06 55.5 64 43.8
TWI15G0590 Tripterygium wilfordii HOM05D000067 ORTHO05D000280 5.8e-06 55.5 64 43.8
CSS0045875 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 7.6e-06 55.1 66 43.9
CiPaw.11G181000 Carya illinoinensis HOM05D000067 ORTHO05D000097 7.6e-06 55.1 98 38.8
CiPaw.11G181100 Carya illinoinensis HOM05D000067 ORTHO05D000097 7.6e-06 55.1 67 46.3
AUR62034218 Chenopodium quinoa HOM05D000067 ORTHO05D000097 7.6e-06 55.1 79 38.0
CsaV3_1G011420 Cucumis sativus L. HOM05D000067 ORTHO05D001807 7.6e-06 55.1 65 46.2
Eucgr.E03563 Eucalyptus grandis HOM05D000067 ORTHO05D000097 7.6e-06 55.1 92 37.0
Oeu050545.1 Olea europaea HOM05D000067 ORTHO05D001807 7.6e-06 55.1 58 48.3
Oeu053381.1 Olea europaea HOM05D000067 ORTHO05D000097 7.6e-06 55.1 79 39.2
RcHm_v2.0_Chr6g0245681 Rosa chinensis HOM05D000067 ORTHO05D000097 7.6e-06 55.1 93 35.5
RcHm_v2.0_Chr6g0245751 Rosa chinensis HOM05D000067 ORTHO05D000097 7.6e-06 55.1 93 35.5
RcHm_v2.0_Chr6g0246001 Rosa chinensis HOM05D000067 ORTHO05D000097 7.6e-06 55.1 93 35.5
PGSC0003DMG400013034 Solanum tuberosum HOM05D000067 ORTHO05D000097 7.6e-06 55.1 96 31.2
GSVIVG01005220001 Vitis vinifera HOM05D000067 ORTHO05D001807 7.6e-06 55.1 95 36.8
MSTRG.16331 Avicennia marina HOM05D000067 ORTHO05D000097 9.9e-06 54.7 90 36.7
CiPaw.10G113300 Carya illinoinensis HOM05D000067 ORTHO05D001807 9.9e-06 54.7 91 41.8
Ciclev10004558m.g Citrus clementina HOM05D000067 ORTHO05D001807 9.9e-06 54.7 100 36.0
FAN01G2138 Fragaria x ananassa HOM05D000067 ORTHO05D000097 9.9e-06 54.7 96 36.5
FAN02G1883 Fragaria x ananassa HOM05D000067 ORTHO05D000097 9.9e-06 54.7 69 43.5
Gohir.A04G106800 Gossypium hirsutum HOM05D000067 ORTHO05D000280 9.9e-06 54.7 88 40.9
HanXRQChr13g0399311 Helianthus annuus HOM05D000067 ORTHO05D000280 9.9e-06 54.7 100 36.0
Lsat_1_v5_gn_2_30961 Lactuca sativa HOM05D000067 ORTHO05D000280 9.9e-06 54.7 82 36.6
Solyc06g060180.3 Solanum lycopersicum HOM05D000067 ORTHO05D000097 9.9e-06 54.7 94 28.7


User provided reference genes

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