Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 2.8e-246 854.7 413 100.0
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 9.6e-178 627.1 404 73.5
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 6.3e-169 597.8 406 70.0
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 2.5e-165 585.9 406 69.2
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 2.2e-145 519.6 409 63.1
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 3.7e-121 439.1 464 48.5
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.5e-117 426.4 399 51.9
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 5.6e-117 425.2 426 49.5
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 6.8e-115 418.3 430 50.2
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 9.8e-114 414.5 410 48.5
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 9.8e-114 414.5 435 49.7
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 3.2e-112 409.5 437 49.9
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 4.1e-112 409.1 427 49.2
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 1.2e-111 407.5 426 49.1
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 2.0e-111 406.8 404 51.5
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 2.0e-111 406.8 429 48.0
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 3.5e-111 406.0 419 47.7
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 1.1e-109 401.0 433 47.6
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 4.3e-109 399.1 437 47.4
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 7.3e-109 398.3 429 47.1
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 1.6e-108 397.1 416 48.1
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 1.2e-106 391.0 423 47.0
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 1.2e-106 391.0 402 46.5
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 1.5e-106 390.6 427 45.9
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 9.8e-106 387.9 454 45.2
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 4.9e-105 385.6 410 48.3
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.9e-104 383.6 433 45.7
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 2.4e-104 383.3 406 45.6
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 3.2e-104 382.9 433 46.0
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 4.1e-104 382.5 423 48.7
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 7.8e-103 378.3 407 46.2
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 4.3e-101 372.5 439 46.5
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 5.6e-101 372.1 432 45.1
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 9.5e-101 371.3 428 44.4
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.6e-100 370.5 428 44.9
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 3.6e-100 369.4 439 45.6
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 4.7e-100 369.0 426 46.5
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 6.2e-100 368.6 430 45.6
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.4e-99 367.5 366 51.4
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.5e-98 364.0 506 41.1
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 4.4e-98 362.5 404 47.5
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 9.9e-98 361.3 431 44.8
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 1.3e-97 360.9 415 45.3
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.1e-96 357.8 426 43.4
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 2.4e-96 356.7 431 43.4
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.1e-93 347.8 431 42.5
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 1.9e-93 347.1 431 42.2
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 3.6e-92 342.8 309 55.7
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 3.6e-92 342.8 434 42.2
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 2.4e-91 340.1 435 42.8
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 4.0e-91 339.3 376 46.3
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 6.8e-91 338.6 434 41.7
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 7.8e-87 325.1 392 44.6
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 1.1e-83 314.7 407 42.0
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 1.2e-79 301.2 396 40.4
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 1.6e-79 300.8 358 44.1
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 2.7e-79 300.1 453 40.0
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 6.0e-79 298.9 357 44.3
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 8.7e-78 295.0 369 43.9
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 8.1e-76 288.5 428 38.6
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 1.4e-75 287.7 449 39.0
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 9.0e-75 285.0 380 41.3
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 2.2e-65 253.8 273 47.3
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 2.9e-65 253.4 369 38.8
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 5.5e-64 249.2 421 37.8
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 5.5e-64 249.2 343 39.7
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.1e-61 241.5 253 48.2
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 1.1e-61 241.5 326 41.7
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 2.1e-60 237.3 423 35.5
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 3.7e-52 209.9 215 49.3
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 1.9e-48 197.6 162 56.8
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.6e-47 193.0 224 43.3
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 4.8e-44 183.0 261 36.4
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 3.2e-40 170.2 224 38.8
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 7.7e-34 149.1 338 30.2
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 6.3e-28 129.4 254 30.3
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 1.2e-26 125.2 86 66.3
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.9e-24 117.9 198 34.8
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 1.3e-20 105.1 107 52.3
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.1e-19 102.1 142 39.4
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 7.7e-18 95.9 71 57.7
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 8.0e-15 85.9 129 35.7
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 3.7e-12 77.0 186 30.6
SalBow4G2112 Salvia bowleyana HOM05D029231 ORTHO05D009887 1.6e-10 71.6 45 66.7
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 4.5e-10 70.1 35 85.7
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 8.6e-09 65.9 128 32.0


User provided reference genes

Program Settings