Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 6.3e-269 930.2 491 100.0
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 1.2e-147 527.3 439 65.1
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 1.0e-125 454.5 456 57.7
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 1.8e-114 417.2 434 55.8
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 1.6e-110 404.1 434 52.1
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 1.5e-108 397.5 442 49.5
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 2.5e-108 396.7 440 49.8
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 2.8e-107 393.3 453 52.8
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 9.9e-105 384.8 441 47.2
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 6.4e-104 382.1 435 49.2
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 3.5e-102 376.3 445 46.3
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 4.6e-102 375.9 432 49.1
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 7.9e-102 375.2 431 49.0
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 6.6e-101 372.1 434 46.3
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 2.5e-100 370.2 431 48.5
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 7.3e-100 368.6 508 43.9
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 1.1e-98 364.8 467 50.5
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 1.4e-98 364.4 435 47.1
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 3.4e-97 359.8 435 46.4
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 5.8e-97 359.0 439 45.8
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 1.7e-96 357.5 415 48.9
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 5.4e-95 352.4 418 46.9
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 1.6e-94 350.9 437 44.4
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 2.1e-94 350.5 435 46.0
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 1.0e-93 348.2 415 45.1
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 1.3e-93 347.8 430 44.9
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.1e-93 345.9 435 45.5
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 5.1e-93 345.9 431 45.7
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 1.1e-92 344.7 431 47.3
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 1.1e-92 344.7 429 44.8
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 1.1e-92 344.7 434 46.8
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 2.1e-91 340.5 431 46.6
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 8.1e-91 338.6 427 47.5
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 8.1e-91 338.6 427 47.5
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 1.1e-90 338.2 412 47.3
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 1.8e-90 337.4 434 45.4
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.4e-90 337.0 433 45.0
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 2.6e-89 333.6 445 43.4
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 3.4e-89 333.2 418 45.9
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 4.5e-89 332.8 421 47.5
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 4.5e-89 332.8 431 45.0
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 5.8e-89 332.4 407 47.9
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 5.8e-89 332.4 429 46.2
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 1.7e-88 330.9 431 46.4
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 9.3e-87 325.1 409 47.4
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 2.1e-86 323.9 435 45.3
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 7.9e-86 322.0 401 47.9
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 1.8e-85 320.9 425 44.9
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.1e-84 318.2 442 41.4
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 1.1e-84 318.2 434 43.5
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 2.5e-84 317.0 442 41.4
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 1.3e-83 314.7 364 47.8
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 2.1e-83 313.9 435 44.6
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 2.8e-83 313.5 432 46.3
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 4.8e-83 312.8 425 44.9
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 8.2e-83 312.0 425 45.6
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 2.4e-82 310.5 434 43.8
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 5.3e-82 309.3 398 45.5
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 6.9e-82 308.9 437 43.5
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 6.9e-82 308.9 427 44.0
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 1.0e-80 305.1 451 43.0
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 5.0e-80 302.8 394 41.9
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 1.4e-79 301.2 433 44.6
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 3.2e-79 300.1 431 44.3
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 7.2e-79 298.9 392 45.9
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 9.3e-79 298.5 433 41.8
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 9.3e-79 298.5 437 43.0
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.2e-78 298.1 433 42.0
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.6e-78 297.7 433 41.8
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 6.1e-78 295.8 422 40.5
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 6.1e-78 295.8 422 40.5
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 1.8e-77 294.3 420 40.2
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 1.8e-77 294.3 422 40.5
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 3.0e-77 293.5 379 46.2
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 5.1e-77 292.7 420 40.0
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 8.7e-77 292.0 425 40.5
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 1.1e-76 291.6 424 39.6
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 1.5e-76 291.2 425 42.8
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 1.5e-76 291.2 512 36.3
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 2.8e-75 287.0 405 45.2
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 6.3e-75 285.8 448 37.9
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 1.1e-74 285.0 432 43.1
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.1e-74 285.0 424 38.9
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 1.8e-74 284.3 385 44.2
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 3.1e-74 283.5 423 38.8
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 9.0e-74 282.0 423 40.0
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 4.5e-73 279.6 299 50.5
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 5.9e-73 279.3 413 40.2
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 1.3e-72 278.1 423 39.5
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 1.4e-71 274.6 420 41.4
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 9.4e-71 271.9 396 38.4
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 1.8e-69 267.7 427 41.5
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 8.8e-69 265.4 401 40.1
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 1.1e-68 265.0 445 37.3
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 3.3e-68 263.5 357 40.9
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 1.8e-66 257.7 403 40.0
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 2.4e-66 257.3 439 39.4
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 9.1e-66 255.4 381 43.0
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 1.9e-63 247.7 316 47.5
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 7.2e-63 245.7 315 47.0
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 4.1e-58 229.9 261 51.0
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 7.0e-58 229.2 420 35.7
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 1.0e-56 225.3 308 44.5
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 2.3e-53 214.2 297 42.4
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.5e-49 200.3 269 45.7
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.2e-48 197.6 427 35.1
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 6.8e-45 186.0 233 43.3
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 9.1e-42 175.6 157 52.9
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 1.1e-39 168.7 315 34.6
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 1.2e-38 165.2 428 30.1
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 3.6e-38 163.7 290 36.9
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 1.8e-37 161.4 468 30.8
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 4.0e-37 160.2 446 28.5
SGA_v2.0_scaffold26G11248 Striga asiatica HOM05D004964 ORTHO05D005918 1.4e-34 151.8 218 44.5
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.8e-34 151.4 420 29.8
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 2.4e-34 151.0 289 32.9
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 5.4e-34 149.8 538 26.4
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 7.0e-34 149.4 190 41.1
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 2.5e-31 141.0 234 39.3
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 8.0e-30 136.0 136 50.0
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 1.0e-29 135.6 219 38.8
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 1.8e-29 134.8 171 47.4
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 1.7e-27 128.3 303 29.7
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 2.2e-27 127.9 165 44.2
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 1.1e-26 125.6 263 32.7
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 1.8e-26 124.8 417 26.9
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 1.2e-25 122.1 237 32.9
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 8.6e-24 115.9 177 35.6
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 1.0e-21 109.0 138 40.6
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 3.4e-20 104.0 85 56.5
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 1.4e-18 98.6 386 27.2
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 3.2e-18 97.4 126 44.4
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 1.2e-17 95.5 251 30.7
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 1.2e-17 95.5 251 30.7
Lsat_1_v5_gn_6_73440 Lactuca sativa HOM05D001771 ORTHO05D001876 4.6e-17 93.6 142 42.3
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 4.6e-17 93.6 165 36.4
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 1.0e-16 92.4 141 41.1
Haze_04422 Corylus avellana HOM05D004964 ORTHO05D005918 1.3e-16 92.0 141 41.1
TPR.G15846 Trifolium pratense HOM05D004964 ORTHO05D005918 6.6e-16 89.7 181 35.9
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 1.2e-14 85.5 112 38.4
Oeu012237.1 Olea europaea HOM05D004964 ORTHO05D005918 3.4e-12 77.4 53 66.0
CDE04G0768 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 7.5e-12 76.3 143 32.2
BolC9t55572H Brassica oleracea HOM05D004964 ORTHO05D005918 4.1e-10 70.5 103 38.8
arahy.Tifrunner.gnm1.ann1.A28SEL Arachis hypogaea HOM05D000231 ORTHO05D005918 1.2e-09 68.9 77 54.5
Psat7g249360 Pisum sativum HOM05D001947 ORTHO05D021361 1.7e-08 65.1 51 60.8
Lsat_1_v5_gn_6_39820 Lactuca sativa HOM05D004964 ORTHO05D005918 2.3e-08 64.7 64 56.2
SEGI_33500 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 6.6e-08 63.2 112 38.4
MD12G1248900 Malus domestica HOM05D004964 ORTHO05D005918 3.3e-07 60.8 62 54.8
MD12G1248100 Malus domestica HOM05D004964 ORTHO05D005918 8.1e-06 56.2 81 37.0


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