Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 7.7e-103 377.1 183 100.0
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 4.6e-39 165.2 184 55.4
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 2.5e-37 159.5 187 54.0
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 4.3e-37 158.7 194 51.5
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 1.3e-36 157.1 194 50.0
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.6e-36 156.8 197 49.7
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 1.8e-35 153.3 190 51.6
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 1.2e-34 150.6 199 50.3
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 4.5e-34 148.7 213 50.2
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 7.6e-34 147.9 210 46.7
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.7e-33 146.7 193 50.8
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 4.9e-33 145.2 206 48.5
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 4.9e-33 145.2 192 49.5
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 4.9e-33 145.2 198 47.5
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 1.4e-32 143.7 197 49.7
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 1.9e-32 143.3 195 51.3
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 1.9e-32 143.3 200 49.0
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 4.2e-32 142.1 197 48.2
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 7.1e-32 141.4 200 48.5
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 1.6e-31 140.2 191 49.7
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.6e-31 140.2 200 46.5
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 1.6e-31 140.2 199 48.7
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.1e-31 139.8 196 47.4
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 2.1e-31 139.8 194 50.5
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 2.7e-31 139.4 192 46.9
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 3.5e-31 139.0 210 45.7
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 4.6e-31 138.7 200 46.5
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.8e-30 136.7 208 48.6
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.3e-30 136.3 200 45.5
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 6.7e-30 134.8 194 46.4
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 3.3e-29 132.5 200 44.5
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 1.3e-28 130.6 207 46.4
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 1.6e-28 130.2 213 45.1
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.6e-28 130.2 206 48.1
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.1e-28 129.8 211 46.9
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 3.7e-28 129.0 206 47.6
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.8e-27 126.7 215 47.0
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 4.0e-27 125.6 199 44.2
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 6.9e-27 124.8 191 45.0
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 4.5e-26 122.1 187 44.4
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 4.5e-26 122.1 204 44.1
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 5.8e-26 121.7 190 45.3
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 8.4e-25 117.9 191 44.0
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.9e-24 116.7 191 45.0
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 1.9e-24 116.7 189 44.4
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 3.2e-24 115.9 189 42.9
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 5.5e-24 115.2 189 43.9
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 1.2e-23 114.0 222 41.9
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 1.6e-23 113.6 194 43.3
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 6.0e-23 111.7 190 42.6
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 1.8e-22 110.2 189 43.4
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 6.7e-22 108.2 194 41.2
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 1.5e-21 107.1 196 42.3
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.9e-21 106.7 166 45.8
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.6e-20 103.6 170 47.1
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 2.8e-20 102.8 169 44.4
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 1.1e-19 100.9 206 38.3
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.4e-19 99.8 180 44.4
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 2.4e-19 99.8 227 38.8
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 3.1e-19 99.4 186 44.1
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 5.3e-19 98.6 200 40.0
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 1.2e-18 97.4 166 43.4
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.2e-18 97.4 239 35.6
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 1.5e-18 97.1 163 44.8
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 3.4e-18 95.9 231 37.7
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 3.4e-18 95.9 195 36.9
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 1.0e-17 94.4 234 35.9
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 1.7e-17 93.6 231 36.4
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 1.7e-17 93.6 233 36.5
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 2.2e-17 93.2 201 36.8
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 2.9e-17 92.8 234 36.3
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 4.9e-17 92.0 176 42.6
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 4.9e-17 92.0 233 36.5
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 4.9e-17 92.0 236 35.6
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 8.4e-17 91.3 167 43.1
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 8.4e-17 91.3 202 36.6
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 1.1e-16 90.9 232 37.9
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 3.2e-16 89.4 240 34.6
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 3.2e-16 89.4 125 47.2
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 3.2e-16 89.4 125 47.2
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 9.3e-16 87.8 230 35.7
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.2e-15 87.4 222 35.6
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 2.1e-15 86.7 113 52.2
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 7.9e-15 84.7 231 36.4
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 1.3e-14 84.0 219 36.5
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 1.3e-14 84.0 219 36.5
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 5.1e-14 82.0 225 36.0
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 6.7e-14 81.6 218 35.3
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 6.7e-14 81.6 232 33.6
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 1.1e-13 80.9 179 36.9
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 3.3e-13 79.3 228 35.1
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.6e-12 77.0 230 35.7
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 5.3e-11 72.0 205 36.6
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 5.3e-11 72.0 197 35.5
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 1.2e-10 70.9 204 36.8
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 5.9e-10 68.6 192 34.9
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 1.0e-09 67.8 162 36.4
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 1.3e-09 67.4 197 34.0
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 1.2e-07 60.8 185 35.1
MBI06_g45442_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 3.6e-07 59.3 146 37.0
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 2.3e-06 56.6 157 30.6
BolC5t30766H Brassica oleracea HOM05D011160 ORTHO05D013203 8.8e-06 54.7 142 33.1
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 8.8e-06 54.7 198 30.8


User provided reference genes

Program Settings