Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14193 Avicennia marina HOM05D033380 ORTHO05D026975 1.2e-111 406.8 244 100.0
Migut.H01045 Erythranthe guttata HOM05D009304 ORTHO05D026975 5.4e-43 178.7 261 56.7
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 1.2e-18 97.8 305 34.8
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 3.3e-16 89.7 304 33.6
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 1.6e-15 87.4 290 32.8
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 3.6e-15 86.3 290 32.8
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 1.1e-14 84.7 291 33.0
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 5.2e-14 82.4 245 33.5
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 5.2e-14 82.4 247 34.8
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 6.8e-14 82.0 293 32.1
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 8.9e-14 81.6 262 32.8
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 4.9e-12 75.9 251 34.3
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 1.9e-11 73.9 273 32.2
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 1.3e-09 67.8 299 31.4
Oeu025512.1 Olea europaea HOM05D009304 ORTHO05D003109 3.0e-09 66.6 283 32.2
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 1.1e-08 64.7 288 31.9
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.9e-08 63.9 281 29.5
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.9e-08 63.9 281 29.5
Solyc08g068460.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 5.6e-08 62.4 261 30.3
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 1.2e-07 61.2 252 31.0
SGA_v2.0_scaffold238G43880 Striga asiatica HOM05D033380 ORTHO05D026975 1.6e-07 60.8 84 50.0
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 2.1e-07 60.5 287 30.3
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 2.8e-07 60.1 268 31.7
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 4.7e-07 59.3 283 30.0
Hma1.2p1_0875F.1_g231510 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 8.1e-07 58.5 216 31.5
Rhsim04G0066200 Rhododendron simsii HOM05D009304 ORTHO05D003109 1.8e-06 57.4 181 34.8
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 3.1e-06 56.6 297 27.3
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 4.0e-06 56.2 298 31.9
SGA_v2.0_scaffold204G41579 Striga asiatica HOM05D033380 ORTHO05D026975 6.8e-06 55.5 41 63.4
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 8.9e-06 55.1 209 31.1
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 8.9e-06 55.1 289 29.1
Solyc01g106180.3 Solanum lycopersicum HOM05D009304 ORTHO05D003109 8.9e-06 55.1 125 32.8


User provided reference genes

Program Settings