Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 0.0e+00 1366.7 690 100.0
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 3.2e-295 1018.1 694 76.4
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 2.9e-275 951.8 666 74.3
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 3.5e-233 812.0 640 65.3
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 7.9e-225 784.3 678 61.5
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 2.3e-224 782.7 683 60.8
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 1.9e-223 779.6 687 59.5
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 4.8e-222 775.0 687 59.4
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 4.0e-221 771.9 687 59.1
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 5.3e-221 771.5 619 64.6
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 7.6e-220 767.7 666 62.3
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 4.9e-219 765.0 646 61.6
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 1.1e-218 763.8 687 59.1
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 1.9e-218 763.1 692 59.5
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 3.2e-218 762.3 681 60.5
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 7.1e-218 761.1 684 58.5
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 2.1e-217 759.6 690 58.7
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 2.1e-217 759.6 651 62.1
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 1.3e-216 756.9 690 58.0
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 1.3e-216 756.9 694 59.1
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 3.9e-216 755.4 677 58.8
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 4.3e-215 751.9 695 57.7
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 4.3e-215 751.9 677 59.1
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 1.3e-214 750.4 644 62.3
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 6.3e-214 748.0 659 60.7
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 6.3e-214 748.0 661 59.9
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 4.1e-213 745.3 686 57.9
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 1.3e-211 740.3 705 55.5
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 3.8e-211 738.8 671 59.5
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 8.5e-211 737.6 683 56.8
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 6.1e-209 731.5 684 59.4
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 1.0e-208 730.7 658 58.1
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 2.3e-208 729.6 678 57.7
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 4.3e-207 725.3 671 55.9
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 9.7e-207 724.2 675 56.1
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 3.7e-206 722.2 656 58.7
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.1e-205 720.7 692 57.5
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 1.1e-205 720.7 669 56.8
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 2.4e-205 719.5 608 64.3
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 3.1e-205 719.2 692 57.8
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 2.0e-204 716.5 699 56.8
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 3.4e-204 715.7 700 56.3
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 3.4e-204 715.7 673 55.6
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.0e-203 714.1 700 56.3
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 5.0e-203 711.8 680 59.1
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 6.5e-203 711.4 679 55.2
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 1.2e-201 707.2 663 57.8
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 4.7e-201 705.3 686 53.8
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 2.0e-199 699.9 662 56.0
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 2.0e-199 699.9 668 54.6
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 3.3e-199 699.1 668 54.3
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 7.4e-199 698.0 699 54.2
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 1.3e-198 697.2 688 53.6
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.3e-198 694.9 652 56.4
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 3.1e-197 692.6 659 56.1
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 7.0e-197 691.4 722 53.7
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 9.1e-197 691.0 659 55.4
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 2.6e-196 689.5 694 52.4
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 2.2e-195 686.4 720 52.9
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 2.2e-195 686.4 703 52.5
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 2.9e-195 686.0 732 53.1
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 5.0e-195 685.3 643 56.0
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 6.5e-195 684.9 712 53.9
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 1.1e-194 684.1 677 53.2
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.1e-194 684.1 720 52.9
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 1.1e-194 684.1 666 56.5
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 1.5e-194 683.7 659 55.1
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 1.9e-194 683.3 743 51.7
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 3.2e-194 682.6 703 52.2
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 9.4e-194 681.0 724 53.2
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.2e-193 680.6 738 52.8
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 1.4e-192 677.2 620 56.9
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 1.4e-192 677.2 772 49.7
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.3e-192 676.4 701 54.8
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 5.2e-192 675.2 616 58.1
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.6e-191 672.9 646 56.5
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 2.6e-191 672.9 670 54.2
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 4.4e-191 672.2 688 52.0
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 7.4e-191 671.4 681 53.2
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 1.3e-190 670.6 690 51.9
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 1.7e-190 670.2 575 61.7
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 8.2e-190 667.9 680 54.6
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 9.1e-189 664.5 659 55.1
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 3.8e-187 659.1 706 51.6
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 3.8e-187 659.1 685 52.6
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 1.1e-186 657.5 690 51.9
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.5e-186 657.1 624 55.8
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.5e-186 657.1 678 53.7
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 3.2e-186 656.0 686 51.9
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 4.2e-186 655.6 638 54.4
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 7.2e-186 654.8 691 51.5
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 2.3e-184 649.8 680 52.6
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 5.2e-184 648.7 664 53.9
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 6.8e-184 648.3 709 49.5
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 6.8e-184 648.3 689 51.2
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 1.2e-183 647.5 711 51.5
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 2.0e-183 646.7 601 57.1
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 1.7e-182 643.7 652 54.0
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 6.3e-182 641.7 701 52.8
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 4.1e-181 639.0 561 60.2
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.6e-180 637.1 635 55.6
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 1.0e-179 634.4 707 49.1
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 2.2e-179 633.3 695 51.7
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 6.5e-179 631.7 662 52.6
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 8.5e-179 631.3 732 49.3
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 8.5e-179 631.3 644 53.1
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 7.2e-178 628.2 668 50.9
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.0e-176 624.4 627 55.2
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 1.0e-176 624.4 683 52.9
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 7.5e-175 618.2 692 49.9
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 4.8e-174 615.5 699 47.6
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 3.5e-172 609.4 578 55.9
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 1.7e-171 607.1 665 49.6
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 8.0e-169 598.2 661 51.0
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 1.3e-166 590.9 686 47.4
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 6.3e-166 588.6 713 47.4
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 8.3e-166 588.2 687 47.2
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 4.5e-164 582.4 647 49.6
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 5.9e-164 582.0 667 48.3
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 7.8e-164 581.6 667 48.3
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.3e-163 580.9 694 49.0
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 3.9e-163 579.3 501 62.3
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 3.3e-162 576.2 616 52.6
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 2.0e-159 567.0 674 47.5
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 2.2e-158 563.5 630 49.8
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 5.0e-155 552.4 680 47.1
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 1.9e-154 550.4 669 47.1
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 2.5e-154 550.1 667 47.1
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 7.1e-149 531.9 475 57.5
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.6e-145 520.8 490 57.8
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 2.1e-145 520.4 690 45.8
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 1.1e-141 508.1 465 58.7
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 1.1e-128 464.9 653 43.6
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 1.9e-122 444.1 766 38.8
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 1.7e-118 431.0 424 56.4
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 2.1e-116 424.1 662 42.0
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 1.0e-115 421.8 645 41.2
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 1.5e-114 417.9 472 48.1
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 4.9e-110 402.9 658 39.5
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 2.1e-108 397.5 635 39.8
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 4.6e-108 396.4 674 38.9
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.0e-107 395.2 345 59.4
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 8.7e-107 392.1 643 39.8
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 3.5e-100 370.2 629 38.8
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.5e-98 364.8 656 39.2
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 3.7e-97 360.1 643 38.6
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.5e-95 354.8 747 35.2
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.4e-93 348.2 756 34.8
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 1.4e-88 331.6 807 32.3
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 6.9e-88 329.3 498 40.6
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 4.2e-85 320.1 515 39.0
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 2.8e-81 307.4 750 32.0
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.6e-79 301.6 346 48.6
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 8.5e-78 295.8 535 37.2
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.7e-73 281.6 217 65.9
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 7.0e-72 276.2 503 38.2
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 1.2e-71 275.4 287 52.3
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 5.9e-71 273.1 209 65.6
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 2.2e-70 271.2 517 35.2
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 6.1e-60 236.5 364 37.9
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 3.0e-30 137.9 273 34.8
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.2e-28 132.5 101 65.3
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.3e-27 128.3 116 56.9
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 1.3e-25 122.5 291 34.0
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 7.3e-21 106.7 109 51.4
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 2.0e-18 98.6 66 69.7
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 5.8e-18 97.1 70 67.1
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 1.1e-13 82.8 52 73.1
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 4.8e-12 77.4 163 33.1
Ah.08g214440 Amaranthus hybridus HOM05D003996 ORTHO05D004665 6.2e-12 77.0 96 45.8
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 1.4e-11 75.9 144 36.1
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 3.5e-07 61.2 54 51.9
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 6.0e-07 60.5 49 57.1
DCAR_019433 Daucus carota HOM05D003996 ORTHO05D004665 7.9e-07 60.1 51 56.9


User provided reference genes

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