Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.4e-64 249.6 137 100.0
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.8e-43 179.5 138 76.8
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.5e-42 175.6 137 75.9
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 9.7e-42 173.7 132 77.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.7e-38 162.9 138 72.5
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 8.2e-33 144.1 101 86.1
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.4e-32 143.3 105 78.1
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.8e-32 142.9 147 60.5
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 2.4e-32 142.5 105 74.3
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 4.1e-32 141.7 101 79.2
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 9.1e-32 140.6 127 68.5
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.2e-31 140.2 102 82.4
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.2e-31 140.2 100 83.0
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.5e-31 139.8 137 63.5
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.5e-31 139.8 110 75.5
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.0e-31 139.4 121 72.7
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.5e-31 138.7 100 82.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 3.5e-31 138.7 100 83.0
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 4.5e-31 138.3 117 74.4
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 4.5e-31 138.3 99 83.8
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 5.9e-31 137.9 100 77.0
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 5.9e-31 137.9 100 77.0
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.9e-31 137.9 102 79.4
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 7.7e-31 137.5 110 75.5
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 7.7e-31 137.5 122 71.3
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.0e-30 137.1 100 79.0
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.0e-30 137.1 100 79.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.0e-30 137.1 102 79.4
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.0e-30 137.1 126 69.0
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.3e-30 136.7 143 58.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.7e-30 136.3 101 82.2
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.7e-30 136.3 130 66.9
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 2.2e-30 136.0 115 77.4
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 2.2e-30 136.0 135 66.7
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.9e-30 135.6 98 82.7
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 2.9e-30 135.6 116 74.1
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 2.9e-30 135.6 110 74.5
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 2.9e-30 135.6 123 69.1
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 5.0e-30 134.8 119 72.3
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 5.0e-30 134.8 119 72.3
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 5.0e-30 134.8 119 72.3
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.0e-30 134.8 102 79.4
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 6.5e-30 134.4 141 60.3
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 6.5e-30 134.4 97 82.5
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 8.5e-30 134.0 119 72.3
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 8.5e-30 134.0 119 72.3
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 8.5e-30 134.0 138 61.6
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 8.5e-30 134.0 99 78.8
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.1e-29 133.7 108 73.1
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.1e-29 133.7 134 66.4
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.4e-29 133.3 119 71.4
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.4e-29 133.3 102 74.5
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.4e-29 133.3 113 75.2
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.9e-29 132.9 98 61.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 2.5e-29 132.5 100 79.0
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 2.5e-29 132.5 146 61.0
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 3.2e-29 132.1 102 79.4
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 4.2e-29 131.7 109 75.2
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 7.2e-29 131.0 105 75.2
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 7.2e-29 131.0 98 81.6
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 9.4e-29 130.6 100 78.0
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.2e-28 130.2 124 64.5
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 2.1e-28 129.4 102 77.5
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 2.7e-28 129.0 98 79.6
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 2.7e-28 129.0 97 82.5
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.7e-28 129.0 98 78.6
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 2.7e-28 129.0 107 75.7
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 3.6e-28 128.6 123 67.5
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 3.6e-28 128.6 133 63.2
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 6.1e-28 127.9 118 68.6
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 6.1e-28 127.9 139 64.0
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 6.1e-28 127.9 99 73.7
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 8.0e-28 127.5 152 57.9
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 8.0e-28 127.5 126 67.5
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 8.0e-28 127.5 98 79.6
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.0e-27 127.1 119 68.9
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.8e-27 126.3 96 78.1
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.0e-27 125.6 117 67.5
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 3.0e-27 125.6 94 78.7
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 3.9e-27 125.2 98 78.6
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 3.9e-27 125.2 110 73.6
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 5.2e-27 124.8 132 61.4
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 5.2e-27 124.8 97 74.2
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 5.2e-27 124.8 97 74.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 6.7e-27 124.4 104 75.0
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 6.7e-27 124.4 104 74.0
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 8.8e-27 124.0 130 65.4
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 8.8e-27 124.0 86 83.7
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.3e-26 122.1 90 78.9
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 3.3e-26 122.1 75 70.7
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 5.7e-26 121.3 104 73.1
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 9.7e-26 120.6 95 77.9
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.7e-25 119.8 102 73.5
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 2.2e-25 119.4 75 73.3
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 1.1e-24 117.1 91 74.7
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.4e-24 116.7 171 52.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 7.0e-24 114.4 87 80.5
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 1.3e-22 110.2 95 69.5
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 1.9e-21 106.3 134 54.5
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 2.5e-21 105.9 109 58.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.6e-20 103.2 83 72.3
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.6e-20 103.2 75 82.7
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 5.2e-19 98.2 71 84.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.6e-18 95.9 71 77.5
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.7e-09 65.5 43 72.1


User provided reference genes

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