Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13944 Avicennia marina HOM05D009522 ORTHO05D009846 7.5e-163 577.4 353 100.0
MSTRG.1612 Avicennia marina HOM05D036756 ORTHO05D009846 8.9e-31 138.7 344 35.8
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 8.9e-15 85.5 343 30.0
Nitab4.5_0001159g0190 Nicotiana tabacum HOM05D009522 ORTHO05D009846 2.3e-10 70.9 185 36.8
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 3.9e-10 70.1 74 55.4
Solyc12g096400.2 Solanum lycopersicum HOM05D009522 ORTHO05D009846 3.9e-10 70.1 168 36.9
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 1.1e-09 68.6 58 63.8
Sopen12g032250 Solanum pennellii HOM05D009522 ORTHO05D009846 1.5e-09 68.2 45 77.8
Oeu040384.1 Olea europaea HOM05D009522 ORTHO05D009846 1.9e-09 67.8 183 35.0
PGSC0003DMG400029280 Solanum tuberosum HOM05D009522 ORTHO05D009846 1.9e-09 67.8 190 33.7
Peaxi162Scf00459g00082 Petunia axillaris HOM05D009522 ORTHO05D009846 3.3e-09 67.0 64 60.9
Peaxi162Scf00288g00084 Petunia axillaris HOM05D009522 ORTHO05D009846 7.3e-09 65.9 72 61.1
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 1.6e-08 64.7 184 34.8
Migut.A00437 Erythranthe guttata HOM05D009522 ORTHO05D009846 1.6e-08 64.7 44 77.3
CAN.G566.64 Capsicum annuum HOM05D009522 ORTHO05D009846 2.1e-08 64.3 114 43.9
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 2.1e-08 64.3 82 53.7
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 2.1e-08 64.3 185 35.1
Nitab4.5_0004131g0040 Nicotiana tabacum HOM05D017514 ORTHO05D009846 4.7e-08 63.2 44 72.7
SGA_v2.0_scaffold27G11671 Striga asiatica HOM05D009522 ORTHO05D009846 6.2e-08 62.8 348 29.3
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 8.1e-08 62.4 151 38.4
Solyc08g069020.1 Solanum lycopersicum HOM05D009522 ORTHO05D009846 1.1e-07 62.0 45 71.1
Peaxi162Scf00045g01739 Petunia axillaris HOM05D017514 ORTHO05D009846 1.8e-07 61.2 78 53.8
PGSC0003DMG400029579 Solanum tuberosum HOM05D009522 ORTHO05D009846 2.4e-07 60.8 85 51.8
Sopen08g002390 Solanum pennellii HOM05D017514 ORTHO05D009846 3.1e-07 60.5 45 73.3
PGSC0003DMG400026295 Solanum tuberosum HOM05D017514 ORTHO05D009846 3.1e-07 60.5 45 73.3
Migut.E01423 Erythranthe guttata HOM05D009522 ORTHO05D009846 4.0e-07 60.1 46 67.4
Nitab4.5_0000502g0110 Nicotiana tabacum HOM05D009522 ORTHO05D009846 4.0e-07 60.1 139 36.0
Nitab4.5_0000555g0230 Nicotiana tabacum HOM05D017514 ORTHO05D009846 4.0e-07 60.1 84 48.8
Sp7g02590 Schrenkiella parvula HOM05D003021 ORTHO05D002235 4.0e-07 60.1 65 55.4
Aa31LG9G16610 Aethionema arabicum HOM05D003021 ORTHO05D002235 5.2e-07 59.7 64 54.7
Ah.10g031940 Amaranthus hybridus HOM05D003021 ORTHO05D002235 6.9e-07 59.3 83 47.0
AT5G39380 Arabidopsis thaliana HOM05D003021 ORTHO05D002235 1.5e-06 58.2 64 56.2
CAN.G673.17 Capsicum annuum HOM05D017514 ORTHO05D009846 1.5e-06 58.2 44 65.9
Thhalv10027728m.g Eutrema salsugineum HOM05D003021 ORTHO05D002235 2.6e-06 57.4 63 52.4
FvH4_5g14370 Fragaria vesca HOM05D003021 ORTHO05D002235 2.6e-06 57.4 60 51.7
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 2.6e-06 57.4 114 37.7
Sopen08g022670 Solanum pennellii HOM05D009522 ORTHO05D009846 2.6e-06 57.4 158 34.8
Potri.015G049600 Populus trichocarpa HOM05D003021 ORTHO05D002235 3.4e-06 57.0 87 47.1
THA.LOC104805496 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 3.4e-06 57.0 53 56.6
FAN08G3689 Fragaria x ananassa HOM05D003021 ORTHO05D002235 4.4e-06 56.6 67 46.3
HanXRQChr09g0264151 Helianthus annuus HOM05D003021 ORTHO05D002235 4.4e-06 56.6 60 56.7
PSO063G5953 Papaver somniferum HOM05D021794 ORTHO05D016335 4.4e-06 56.6 83 48.2
PSO170G4909 Papaver somniferum HOM05D021794 ORTHO05D016335 4.4e-06 56.6 83 48.2
PGR083G2506 Punica granatum HOM05D003021 ORTHO05D002235 4.4e-06 56.6 86 48.8
AL7G50940 Arabidopsis lyrata HOM05D003021 ORTHO05D002235 5.8e-06 56.2 64 54.7
BcaB06g27294 Brassica carinata HOM05D003021 ORTHO05D002235 5.8e-06 56.2 54 57.4
C04p45710 Brassica napus HOM05D003021 ORTHO05D002235 5.8e-06 56.2 54 57.4
BolC4t26155H Brassica oleracea HOM05D003021 ORTHO05D002235 5.8e-06 56.2 54 57.4
CDE05G2252 Ceratophyllum demersum HOM05D003021 ORTHO05D002235 5.8e-06 56.2 65 46.2
AUR62018150 Chenopodium quinoa HOM05D003021 ORTHO05D002235 5.8e-06 56.2 62 56.5
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 5.8e-06 56.2 44 65.9
ATR0564G160 Amborella trichopoda HOM05D003021 ORTHO05D002235 7.6e-06 55.8 51 60.8
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 7.6e-06 55.8 54 61.1
Dinv21138 Davidia involucrata HOM05D003021 ORTHO05D009846 7.6e-06 55.8 37 78.4
FAN13G0757 Fragaria x ananassa HOM05D003021 ORTHO05D002235 7.6e-06 55.8 67 46.3
Sed0026957 Sechium edule HOM05D003021 ORTHO05D002235 7.6e-06 55.8 99 37.4
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 7.6e-06 55.8 49 61.2
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 9.9e-06 55.5 55 60.0
TAR622G0013 Trochodendron aralioides HOM05D003021 ORTHO05D002235 9.9e-06 55.5 92 43.5


User provided reference genes

Program Settings