Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13928 Avicennia marina HOM05D006943 ORTHO05D008565 1.3e-70 269.6 136 100.0
MSTRG.13939 Avicennia marina HOM05D006943 ORTHO05D008565 4.9e-70 267.7 136 98.5
MSTRG.13927 Avicennia marina HOM05D006943 ORTHO05D008565 1.7e-67 259.2 133 97.7
MSTRG.13926 Avicennia marina HOM05D006943 ORTHO05D008565 1.9e-66 255.8 136 94.1
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 7.9e-44 180.6 138 68.8
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 2.6e-39 165.6 141 58.9
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 2.6e-39 165.6 141 58.9
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 2.1e-28 129.4 132 52.3
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 1.8e-19 99.8 132 43.2
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 2.5e-18 95.9 71 64.8
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 7.2e-13 77.8 71 54.9
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 7.2e-13 77.8 96 43.8
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 4.7e-12 75.1 113 39.8
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 7.9e-12 74.3 74 54.1
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.8e-11 73.2 81 43.2
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.8e-11 73.2 81 43.2
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 1.8e-11 73.2 129 38.0
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 1.1e-10 70.5 103 41.7
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.5e-10 70.1 167 32.9
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 2.0e-10 69.7 112 39.3
Rhsim01G0256100 Rhododendron simsii HOM05D006943 ORTHO05D008565 2.6e-10 69.3 102 43.1
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 4.4e-10 68.6 81 42.0
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 5.7e-10 68.2 167 29.9
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 7.4e-10 67.8 110 38.2
Thecc.09G002300 Theobroma cacao HOM05D006943 ORTHO05D008565 1.7e-09 66.6 62 48.4
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 2.4e-08 62.8 74 47.3
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 5.3e-08 61.6 71 47.9
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 9.1e-08 60.8 79 45.6
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 1.2e-07 60.5 74 45.9
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 1.5e-07 60.1 167 27.5
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 1.5e-07 60.1 71 45.1
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 4.5e-07 58.5 79 45.6
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 1.7e-06 56.6 80 45.0
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 1.7e-06 56.6 130 32.3
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 2.2e-06 56.2 83 38.6
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 2.2e-06 56.2 94 35.1
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 2.9e-06 55.8 86 38.4
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 3.8e-06 55.5 133 35.3
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 3.8e-06 55.5 74 37.8
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 8.5e-06 54.3 76 39.5
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 8.5e-06 54.3 90 40.0


User provided reference genes

Program Settings