Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.4e-187 659.4 332 100.0
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 2.5e-115 419.5 325 70.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 5.1e-105 385.2 324 63.9
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.9e-104 383.3 317 64.7
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 7.4e-104 381.3 325 63.4
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 3.7e-103 379.0 325 63.1
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.4e-102 377.1 307 65.5
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 9.4e-99 364.4 298 66.4
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 2.3e-97 359.8 300 64.0
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 2.6e-96 356.3 327 59.9
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 9.7e-96 354.4 305 62.6
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 1.3e-95 354.0 305 62.0
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.7e-95 353.6 316 61.4
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.1e-94 350.9 305 61.3
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.4e-94 349.7 291 63.9
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.1e-94 349.0 299 62.5
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 2.0e-93 346.7 299 62.2
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.7e-92 343.6 300 61.0
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 5.0e-92 342.0 324 58.6
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.4e-91 340.5 324 58.3
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.9e-91 340.1 289 62.6
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.2e-90 337.4 305 60.0
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.1e-90 336.7 299 61.2
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 3.6e-90 335.9 324 58.0
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.4e-89 334.0 321 59.8
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.4e-89 334.0 311 58.5
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.1e-88 330.9 267 68.2
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.5e-88 330.5 305 58.4
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.5e-88 330.5 297 59.6
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.4e-88 328.9 324 57.1
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.7e-88 328.6 338 54.7
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 4.8e-87 325.5 215 74.0
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 6.3e-87 325.1 215 74.4
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.2e-87 324.7 289 60.2
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 5.3e-86 322.0 215 74.0
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.0e-85 320.1 289 59.5
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.5e-85 319.3 267 62.2
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 3.5e-85 319.3 215 73.5
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.8e-84 315.8 215 72.1
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.0e-84 315.5 215 71.6
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 2.5e-83 313.2 215 70.2
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 4.2e-83 312.4 215 71.6
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 5.5e-83 312.0 215 71.6
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 9.4e-83 311.2 284 57.7
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 1.2e-82 310.8 254 61.8
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.2e-82 310.8 215 72.6
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.6e-82 310.5 215 68.8
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 2.7e-82 309.7 215 70.2
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.6e-82 309.3 214 71.0
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 4.7e-82 308.9 215 68.8
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.0e-81 307.8 290 57.9
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.4e-81 307.4 215 68.4
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.8e-81 307.0 240 66.7
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.3e-81 306.6 215 70.2
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 2.3e-81 306.6 215 67.9
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 3.0e-81 306.2 219 69.4
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 3.0e-81 306.2 215 70.2
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.2e-80 304.3 266 60.9
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 2.6e-80 303.1 215 69.3
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 5.7e-80 302.0 217 70.0
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.5e-80 301.6 240 65.8
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 7.5e-80 301.6 216 68.5
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.3e-79 300.8 217 70.0
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 4.8e-79 298.9 215 68.4
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 4.8e-79 298.9 269 58.7
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.1e-78 297.7 217 68.7
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.1e-78 297.7 217 69.1
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.8e-78 297.0 237 64.1
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.0e-78 295.0 217 68.2
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.0e-77 293.5 273 59.3
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.5e-77 292.7 270 56.7
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.0e-76 291.2 215 67.0
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 2.2e-76 290.0 297 53.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 8.5e-76 288.1 202 71.3
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.9e-75 287.0 227 65.6
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.5e-75 286.6 249 61.0
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.5e-75 285.4 202 70.8
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.2e-74 284.3 217 63.1
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 2.1e-74 283.5 217 63.6
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-73 280.8 279 55.2
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.8e-73 280.4 215 66.0
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 7.5e-72 275.0 290 55.5
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.5e-72 275.0 218 66.1
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 7.5e-72 275.0 283 55.1
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 1.1e-70 271.2 215 67.0
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.0e-68 264.6 243 56.8
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.7e-68 263.8 232 59.1
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 1.1e-67 261.2 263 54.4
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 4.7e-66 255.8 225 60.0
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 4.7e-66 255.8 253 56.5
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.8e-65 253.8 249 55.4
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 6.8e-65 251.9 229 58.5
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 6.8e-65 251.9 229 58.5
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 6.8e-65 251.9 229 58.5
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 2.6e-64 250.0 238 55.5
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.4e-64 249.2 219 60.3
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 9.8e-64 248.1 251 54.2
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 2.8e-63 246.5 216 59.3
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 3.5e-61 239.6 215 60.0
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 4.5e-61 239.2 215 60.0
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 2.9e-60 236.5 218 55.5
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 8.6e-60 235.0 229 56.8
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 8.6e-60 235.0 229 56.8
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 3.3e-59 233.0 255 52.5
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 5.6e-59 232.3 242 55.4
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 5.6e-59 232.3 242 55.4
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 9.5e-59 231.5 248 53.6
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 9.5e-59 231.5 251 51.4
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 1.7e-44 184.1 152 59.9
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 6.2e-34 149.1 92 79.3
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 4.9e-31 139.4 92 75.0
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 2.6e-24 117.1 219 34.2
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 6.4e-23 112.5 94 58.5
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.4e-22 110.5 203 39.4
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 9.3e-22 108.6 87 62.1
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 6.0e-21 105.9 236 30.9
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 6.2e-18 95.9 171 37.4
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 1.2e-16 91.7 292 33.6
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 3.2e-14 83.6 233 29.2
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 3.0e-12 77.0 187 28.9
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.3e-11 73.2 48 72.9
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 1.3e-10 71.6 73 57.5


User provided reference genes

Program Settings