Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 2.8e-55 218.4 111 100.0
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 6.2e-31 137.5 88 81.8
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 1.2e-29 133.3 88 78.4
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 7.1e-27 124.0 88 72.7
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 9.3e-27 123.6 88 71.6
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 9.3e-27 123.6 88 70.5
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 2.1e-26 122.5 88 72.7
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 4.6e-26 121.3 88 69.3
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 6.0e-26 120.9 88 72.7
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.0e-25 120.2 88 69.3
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.0e-25 120.2 88 69.3
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 1.8e-25 119.4 88 70.5
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 1.8e-25 119.4 88 70.5
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 1.8e-25 119.4 88 70.5
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 3.0e-25 118.6 88 70.5
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 3.9e-25 118.2 88 69.3
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 3.9e-25 118.2 88 70.5
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 5.1e-25 117.9 88 70.5
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 5.1e-25 117.9 88 69.3
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 5.1e-25 117.9 88 67.0
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 8.7e-25 117.1 88 69.3
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 8.7e-25 117.1 88 68.2
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 8.7e-25 117.1 88 68.2
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 8.7e-25 117.1 88 69.3
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 1.1e-24 116.7 88 68.2
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 1.1e-24 116.7 108 61.1
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.5e-24 116.3 88 68.2
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 1.5e-24 116.3 88 69.3
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 1.5e-24 116.3 88 68.2
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.9e-24 115.9 88 67.0
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 1.9e-24 115.9 88 68.2
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 1.9e-24 115.9 88 68.2
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 1.9e-24 115.9 86 70.9
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 2.5e-24 115.5 88 67.0
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 3.3e-24 115.2 88 64.8
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 4.3e-24 114.8 88 69.3
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 4.3e-24 114.8 88 67.0
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 4.3e-24 114.8 88 68.2
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 5.6e-24 114.4 88 68.2
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 5.6e-24 114.4 88 68.2
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 5.6e-24 114.4 88 68.2
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 5.6e-24 114.4 88 68.2
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 7.4e-24 114.0 88 65.9
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 7.4e-24 114.0 88 64.8
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 9.6e-24 113.6 89 69.7
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 9.6e-24 113.6 88 65.9
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 9.6e-24 113.6 88 67.0
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 1.3e-23 113.2 88 67.0
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 1.6e-23 112.8 88 67.0
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 1.6e-23 112.8 88 69.3
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 1.6e-23 112.8 86 69.8
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 1.6e-23 112.8 88 67.0
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 2.1e-23 112.5 88 63.6
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 2.1e-23 112.5 88 67.0
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 2.1e-23 112.5 85 70.6
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 2.8e-23 112.1 88 65.9
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 2.8e-23 112.1 88 67.0
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 2.8e-23 112.1 86 69.8
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 4.8e-23 111.3 88 65.9
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 4.8e-23 111.3 88 64.8
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 4.8e-23 111.3 88 64.8
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 6.2e-23 110.9 88 68.2
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 8.2e-23 110.5 88 64.8
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.8e-22 109.4 115 54.8
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.8e-22 109.4 88 68.2
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.8e-22 109.4 88 67.0
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 2.4e-22 109.0 88 64.8
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.4e-22 109.0 88 64.8
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 4.0e-22 108.2 115 54.8
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 4.0e-22 108.2 80 72.5
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 4.0e-22 108.2 80 72.5
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.0e-22 108.2 105 58.1
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 4.0e-22 108.2 88 64.8
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 5.3e-22 107.8 115 53.9
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 5.3e-22 107.8 86 65.1
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 5.3e-22 107.8 88 65.9
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 5.3e-22 107.8 88 67.0
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 9.0e-22 107.1 105 57.1
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 9.0e-22 107.1 88 65.9
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.2e-21 106.7 88 64.8
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 1.2e-21 106.7 88 67.0
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.5e-21 106.3 88 64.8
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 1.5e-21 106.3 88 63.6
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 2.0e-21 105.9 88 63.6
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 2.0e-21 105.9 88 63.6
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 2.0e-21 105.9 88 63.6
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.6e-21 105.5 105 56.2
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 3.4e-21 105.1 88 63.6
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 3.4e-21 105.1 88 63.6
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 3.4e-21 105.1 88 60.2
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 3.4e-21 105.1 88 63.6
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 3.4e-21 105.1 88 64.8
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 4.5e-21 104.8 88 63.6
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 4.5e-21 104.8 88 62.5
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 5.8e-21 104.4 88 62.5
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 5.8e-21 104.4 88 65.9
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 7.6e-21 104.0 88 62.5
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 7.6e-21 104.0 88 60.2
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.0e-20 103.6 86 62.8
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.3e-20 103.2 88 62.5
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 1.3e-20 103.2 88 60.2
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 2.2e-20 102.4 88 63.6
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.2e-20 102.4 80 70.0
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 2.2e-20 102.4 88 62.5
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.8e-20 101.7 88 62.5
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 3.8e-20 101.7 80 68.8
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 6.5e-20 100.9 88 61.4
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 8.4e-20 100.5 88 61.4
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.1e-19 100.1 85 63.5
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 1.4e-19 99.8 86 59.3
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.9e-19 99.4 88 60.2
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 7.1e-19 97.4 80 67.5
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 9.3e-19 97.1 83 61.4
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 3.5e-18 95.1 88 55.7
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 1.3e-17 93.2 85 57.6
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 5.1e-17 91.3 71 69.0
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 5.1e-17 91.3 71 70.4
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 6.7e-17 90.9 71 69.0
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 6.7e-17 90.9 88 54.5
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 3.3e-16 88.6 80 58.8
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 4.3e-16 88.2 66 71.2
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 4.3e-16 88.2 88 54.5
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 5.7e-16 87.8 88 52.3
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 1.4e-14 83.2 76 57.9
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 4.1e-14 81.6 92 50.0
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 1.0e-12 77.0 79 53.2
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 2.5e-11 72.4 79 50.6
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.0e-09 67.0 76 47.4
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 3.0e-09 65.5 88 42.0
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 6.7e-09 64.3 64 48.4
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 6.7e-09 64.3 92 43.5
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 4.3e-08 61.6 45 68.9
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.2e-07 59.3 54 57.4
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 6.3e-07 57.8 47 72.3
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 3.1e-06 55.5 51 58.8


User provided reference genes

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