Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 1.8e-207 725.7 372 100.0
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 2.2e-165 585.9 380 80.8
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 3.2e-148 528.9 371 74.7
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 2.1e-147 526.2 370 75.7
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 2.7e-147 525.8 377 73.5
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 3.6e-147 525.4 429 65.7
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 2.3e-146 522.7 372 74.5
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 3.0e-146 522.3 374 74.1
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 8.8e-146 520.8 381 73.8
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 4.4e-145 518.5 380 72.4
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 5.7e-145 518.1 373 71.6
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 1.3e-144 516.9 378 72.0
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 1.3e-144 516.9 370 75.1
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 2.2e-144 516.2 382 71.2
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 2.8e-144 515.8 381 71.9
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 3.7e-144 515.4 375 72.3
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 1.1e-143 513.8 369 72.6
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 1.4e-143 513.5 385 72.7
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 4.1e-143 511.9 374 72.2
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 4.1e-143 511.9 383 72.1
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 6.9e-143 511.1 378 70.9
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 6.9e-143 511.1 378 70.9
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 6.9e-143 511.1 373 72.9
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 2.6e-142 509.2 372 71.2
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 7.7e-142 507.7 312 81.7
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.7e-141 506.5 380 70.3
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 1.7e-141 506.5 337 77.2
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 1.1e-140 503.8 315 80.3
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 1.4e-140 503.4 372 71.8
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 1.4e-140 503.4 373 71.6
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 1.9e-140 503.1 387 70.0
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 1.9e-140 503.1 344 76.2
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 4.2e-140 501.9 318 81.4
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 4.2e-140 501.9 319 79.3
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 4.2e-140 501.9 372 70.4
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 9.4e-140 500.7 372 70.7
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 9.4e-140 500.7 381 70.1
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 1.2e-139 500.4 294 83.7
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 1.6e-139 500.0 321 78.5
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 3.6e-139 498.8 372 70.4
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 4.7e-139 498.4 322 78.9
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 4.7e-139 498.4 317 78.9
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 6.1e-139 498.0 321 79.8
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 7.9e-139 497.7 346 76.6
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 2.3e-138 496.1 372 70.4
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 1.5e-137 493.4 328 77.7
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 2.0e-137 493.0 376 70.5
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 5.7e-137 491.5 375 70.7
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 1.3e-136 490.3 315 77.5
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 1.3e-136 490.3 376 69.9
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 1.7e-136 490.0 340 74.7
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 2.8e-136 489.2 329 77.2
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 6.3e-136 488.0 355 73.2
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 8.2e-136 487.6 304 79.9
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 1.1e-135 487.3 373 70.0
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 1.4e-135 486.9 326 76.1
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.8e-135 486.5 318 78.0
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 2.4e-135 486.1 379 68.6
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 3.1e-135 485.7 377 69.8
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 4.1e-135 485.3 372 68.8
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 9.1e-135 484.2 372 71.5
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 1.2e-134 483.8 309 79.9
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 1.2e-134 483.8 371 69.8
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 1.6e-134 483.4 392 67.9
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 5.9e-134 481.5 337 74.8
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 7.7e-134 481.1 320 76.6
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.7e-133 479.9 320 76.2
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 1.7e-133 479.9 306 80.1
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 2.9e-133 479.2 375 68.8
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 2.9e-133 479.2 333 72.4
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 8.5e-133 477.6 434 62.2
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 1.9e-132 476.5 357 70.6
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 2.5e-132 476.1 332 74.4
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 3.2e-132 475.7 320 77.8
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 5.5e-132 474.9 335 74.0
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 3.0e-130 469.2 339 70.8
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 4.0e-130 468.8 369 68.6
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 3.7e-128 462.2 329 71.1
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 6.3e-128 461.5 322 72.4
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.1e-127 460.7 334 69.2
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.4e-127 460.3 359 64.9
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 1.4e-127 460.3 376 66.2
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.8e-127 459.9 312 72.4
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 3.1e-127 459.1 335 68.7
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 4.1e-127 458.8 319 71.5
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 5.3e-127 458.4 320 71.6
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 5.3e-127 458.4 320 71.6
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 5.3e-127 458.4 294 75.5
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 9.1e-127 457.6 319 71.2
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 1.2e-126 457.2 314 72.0
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 1.2e-126 457.2 319 70.8
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 2.7e-126 456.1 317 71.3
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 2.7e-126 456.1 317 71.3
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 2.7e-126 456.1 314 72.0
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 1.3e-125 453.8 300 73.3
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 2.2e-125 453.0 317 71.0
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.1e-124 450.7 300 74.0
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 1.5e-124 450.3 281 77.9
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.2e-123 447.2 277 78.3
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.2e-123 447.2 334 70.1
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 8.0e-123 444.5 351 65.2
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.0e-122 444.1 319 71.8
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.8e-122 443.4 315 72.1
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 8.8e-122 441.0 369 61.8
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 1.2e-121 440.7 327 67.6
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.5e-121 440.3 277 76.5
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.5e-121 440.3 278 76.3
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 3.4e-121 439.1 330 71.5
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 9.8e-121 437.6 314 71.0
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 2.2e-120 436.4 277 76.2
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 3.7e-120 435.6 278 75.9
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 3.7e-120 435.6 278 75.9
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 4.8e-120 435.3 277 76.2
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 8.3e-120 434.5 273 76.9
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 2.4e-119 433.0 342 65.5
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 2.4e-119 433.0 268 81.7
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 4.1e-119 432.2 342 65.2
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 5.4e-119 431.8 342 65.2
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 5.4e-119 431.8 342 65.2
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 2.7e-118 429.5 339 64.9
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 3.5e-118 429.1 334 65.9
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 9.8e-113 411.0 361 61.2
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 1.9e-108 396.7 333 62.2
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 4.3e-108 395.6 296 67.2
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 2.2e-104 383.3 307 67.8
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 1.6e-102 377.1 263 72.6
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 5.0e-101 372.1 216 85.6
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 2.1e-99 366.7 306 65.4
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 6.8e-98 361.7 297 66.7
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 4.6e-94 349.0 270 68.9
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 9.8e-89 331.3 191 88.5
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 2.4e-87 326.6 273 58.6
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.3e-85 320.9 320 51.6
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.7e-85 320.5 330 51.5
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 2.3e-82 310.1 239 70.3
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.5e-81 307.4 239 70.3
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 1.5e-76 290.8 274 61.3
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 7.1e-71 271.9 255 52.2
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 9.3e-71 271.6 258 61.6
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 3.2e-63 246.5 183 71.0
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 1.0e-61 241.5 179 69.3
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 3.0e-61 240.0 179 69.3
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 7.4e-60 235.3 179 68.2
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 1.8e-58 230.7 135 83.0
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 9.0e-58 228.4 162 75.9
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 1.5e-41 174.5 103 80.6
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 1.5e-41 174.5 179 54.7
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 2.0e-41 174.1 116 73.3
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 3.2e-39 166.8 157 54.8
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 6.3e-35 152.5 131 64.9
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 5.5e-31 139.4 77 83.1
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 3.6e-30 136.7 77 80.5
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 1.4e-29 134.8 79 81.0
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 2.6e-28 130.6 98 67.3
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 2.4e-26 124.0 114 49.1
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 5.3e-26 122.9 62 87.1
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 2.2e-24 117.5 88 67.0
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 8.5e-24 115.5 102 52.0
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 1.4e-23 114.8 73 75.3
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 9.7e-20 102.1 104 56.7
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 2.8e-19 100.5 53 88.7
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 3.7e-19 100.1 141 40.4
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 1.6e-17 94.7 57 84.2
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 2.9e-16 90.5 55 80.0
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 1.2e-14 85.1 55 78.2
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 1.8e-13 81.3 59 64.4
Aa31sc185G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 9.4e-07 58.9 36 69.4


User provided reference genes

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