Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 9.1e-182 640.2 343 100.0
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 1.3e-122 443.7 344 68.9
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 3.1e-121 439.1 286 76.9
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 3.1e-121 439.1 337 69.1
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 5.3e-121 438.3 347 68.3
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 1.2e-120 437.2 345 67.0
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 2.6e-120 436.0 348 67.2
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 3.4e-120 435.6 281 75.8
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.2e-117 427.2 318 70.1
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 2.7e-117 426.0 306 69.9
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 2.7e-117 426.0 289 73.4
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 7.9e-117 424.5 335 67.8
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 5.1e-116 421.8 289 72.7
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 6.7e-116 421.4 292 71.9
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 6.7e-116 421.4 357 64.7
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 8.7e-116 421.0 291 72.2
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 4.3e-115 418.7 279 76.0
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 7.4e-115 417.9 286 72.4
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 2.1e-114 416.4 358 62.8
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 4.8e-114 415.2 351 63.8
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 6.2e-114 414.8 290 72.4
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 1.1e-113 414.1 283 72.8
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.8e-113 413.3 277 74.0
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 5.3e-113 411.8 292 72.3
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 9.0e-113 411.0 281 71.9
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 1.5e-112 410.2 289 71.3
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 3.4e-112 409.1 287 72.1
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 3.4e-112 409.1 288 69.8
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 4.5e-112 408.7 286 69.9
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 7.6e-112 407.9 293 68.9
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.0e-111 407.5 361 62.6
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 1.3e-111 407.1 332 63.6
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 1.3e-111 407.1 289 69.9
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 1.7e-111 406.8 353 62.3
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 1.7e-111 406.8 278 73.0
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.2e-111 406.4 345 60.9
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 2.9e-111 406.0 285 70.5
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 3.8e-111 405.6 329 64.4
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 6.5e-111 404.8 329 64.4
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.1e-110 404.1 279 72.0
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 1.4e-110 403.7 350 66.9
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 5.5e-110 401.7 358 60.9
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 7.1e-110 401.4 326 67.5
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 7.1e-110 401.4 358 64.2
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 1.6e-109 400.2 290 68.6
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 2.7e-109 399.4 291 67.7
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 4.6e-109 398.7 358 60.9
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 1.0e-108 397.5 360 60.0
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.3e-108 397.1 284 70.1
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 2.3e-108 396.4 353 62.3
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 3.9e-108 395.6 360 59.7
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 3.9e-108 395.6 360 59.7
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 3.9e-108 395.6 360 59.7
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 3.9e-108 395.6 360 59.7
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 8.7e-108 394.4 284 68.0
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 1.1e-107 394.0 351 59.3
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 3.3e-107 392.5 350 58.9
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 3.3e-107 392.5 344 60.8
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 3.3e-107 392.5 287 68.6
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 4.3e-107 392.1 358 58.7
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 4.3e-107 392.1 322 63.0
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 5.7e-107 391.7 292 66.8
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 5.7e-107 391.7 350 59.1
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 9.7e-107 391.0 295 65.4
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 9.7e-107 391.0 350 58.9
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.3e-106 390.6 291 68.0
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 1.3e-106 390.6 279 71.0
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 8.2e-106 387.9 269 68.0
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.4e-105 387.1 325 61.8
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 3.1e-105 386.0 263 72.6
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 2.0e-104 383.3 354 58.8
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.0e-103 380.9 357 59.1
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.1e-102 377.5 349 57.9
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 1.9e-102 376.7 319 60.5
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 2.1e-101 373.2 279 66.3
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.5e-99 367.1 260 70.8
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 2.4e-97 359.8 261 67.0
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 4.1e-97 359.0 249 66.7
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 2.6e-96 356.3 363 54.8
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 5.9e-96 355.1 265 67.2
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 3.8e-95 352.4 268 63.4
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 5.0e-95 352.1 378 51.9
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 1.1e-94 350.9 361 58.7
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 3.6e-93 345.9 303 58.7
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 1.0e-92 344.4 291 58.4
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 4.4e-91 339.0 249 64.7
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 7.4e-91 338.2 264 63.3
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 1.7e-90 337.0 262 63.0
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 1.1e-89 334.3 361 54.6
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 1.4e-89 334.0 249 66.7
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.1e-89 332.8 247 66.8
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 9.1e-89 331.3 242 67.8
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.5e-88 330.5 264 62.5
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 7.7e-88 328.2 265 60.0
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 7.7e-88 328.2 265 60.0
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 7.7e-88 328.2 267 61.4
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.0e-87 327.8 267 62.5
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.2e-87 326.6 248 64.9
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 5.0e-87 325.5 271 60.5
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 5.5e-86 322.0 241 67.2
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 2.1e-85 320.1 255 61.2
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 1.8e-84 317.0 259 70.3
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 9.7e-83 311.2 265 56.6
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 9.7e-83 311.2 265 56.6
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 1.3e-82 310.8 264 58.3
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-82 310.5 265 57.4
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-82 310.5 265 57.4
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 3.7e-82 309.3 265 58.1
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 4.8e-82 308.9 264 58.0
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 4.8e-82 308.9 264 58.0
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 9.1e-81 304.7 224 65.2
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 4.5e-80 302.4 264 57.2
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 9.4e-78 294.7 265 55.5
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 8.8e-76 288.1 257 54.9
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 3.4e-75 286.2 262 52.7
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 1.7e-74 283.9 268 53.0
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 2.8e-74 283.1 272 52.2
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 3.7e-74 282.7 264 55.7
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 8.3e-74 281.6 272 52.2
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 1.1e-73 281.2 268 53.0
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 1.8e-73 280.4 263 52.5
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 4.1e-73 279.3 269 50.9
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 4.1e-73 279.3 257 54.1
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 5.9e-72 275.4 250 57.6
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 3.8e-71 272.7 232 57.3
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 8.5e-71 271.6 257 54.9
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.6e-69 267.3 230 56.5
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 1.4e-68 264.2 173 75.1
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.0e-68 263.1 242 55.8
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 4.4e-67 259.2 183 69.9
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 7.5e-67 258.5 193 66.8
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-66 257.7 265 50.6
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-66 257.3 265 50.6
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.7e-66 256.1 262 52.3
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 9.1e-65 251.5 258 49.2
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 1.7e-63 247.3 172 69.2
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 8.3e-58 228.4 224 53.6
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.8e-57 227.3 229 48.9
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.5e-54 217.6 267 46.1
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 1.6e-53 214.2 403 37.0
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 1.4e-52 211.1 269 45.7
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.5e-51 207.6 168 58.9
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.2e-49 199.9 179 54.2
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.0e-47 194.9 131 71.0
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 2.0e-43 180.6 145 59.3
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.2e-42 177.2 137 62.8
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 6.4e-42 175.6 166 51.8
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 3.5e-40 169.9 233 39.9
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 4.6e-40 169.5 224 45.5
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 7.1e-33 145.6 96 72.9
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 3.5e-32 143.3 126 61.1
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 2.8e-29 133.7 215 39.5
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 5.4e-25 119.4 239 33.5
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 1.6e-24 117.9 180 41.1
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.5e-22 111.3 72 75.0
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 5.6e-22 109.4 246 30.9
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 7.3e-22 109.0 122 49.2
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 1.4e-20 104.8 87 59.8
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 3.1e-20 103.6 110 48.2
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 4.0e-20 103.2 88 63.6
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 2.2e-18 97.4 65 73.8
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 3.2e-17 93.6 120 52.5
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 5.4e-17 92.8 181 34.3
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 3.5e-16 90.1 68 67.6
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 1.1e-12 78.6 66 56.1
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 4.0e-12 76.6 47 72.3
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 1.5e-11 74.7 69 52.2
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 6.4e-10 69.3 91 45.1
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 8.4e-10 68.9 58 62.1
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.2e-08 65.1 64 53.1
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 1.0e-07 62.0 79 46.8
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 3.9e-07 60.1 271 26.6


User provided reference genes

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