Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 9.9e-92 340.1 173 100.0
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 2.2e-43 179.5 175 55.4
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 9.1e-37 157.5 170 51.2
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 1.2e-36 157.1 175 51.4
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 2.2e-35 152.9 143 54.5
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 2.5e-34 149.4 165 47.9
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 3.2e-34 149.1 144 54.9
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 4.2e-34 148.7 170 50.0
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 7.2e-34 147.9 149 53.7
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 4.7e-33 145.2 160 50.0
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 4.7e-33 145.2 121 61.2
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 4.7e-33 145.2 167 45.5
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 4.7e-33 145.2 167 49.7
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 6.1e-33 144.8 159 48.4
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.0e-32 144.1 166 48.8
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 2.3e-32 142.9 123 55.3
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 2.3e-32 142.9 174 48.3
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 3.9e-32 142.1 166 49.4
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 6.7e-32 141.4 115 60.9
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 8.8e-32 141.0 178 44.9
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.1e-31 140.6 129 58.1
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.5e-31 140.2 134 55.2
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.5e-31 140.2 159 48.4
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.0e-31 139.8 132 56.8
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 2.6e-31 139.4 163 47.9
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 5.7e-31 138.3 113 60.2
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 9.7e-31 137.5 115 57.4
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 1.7e-30 136.7 171 43.9
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.2e-30 136.3 144 49.3
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 2.8e-30 136.0 175 48.6
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 2.8e-30 136.0 161 47.8
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 6.3e-30 134.8 123 52.8
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 6.3e-30 134.8 158 51.3
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 8.2e-30 134.4 158 43.0
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 1.1e-29 134.0 175 45.1
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.1e-29 134.0 114 57.0
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.4e-29 133.7 144 50.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 1.4e-29 133.7 188 43.1
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 1.8e-29 133.3 117 56.4
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 1.8e-29 133.3 116 56.9
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.8e-29 133.3 112 59.8
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 1.8e-29 133.3 175 44.0
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 3.1e-29 132.5 147 50.3
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 4.1e-29 132.1 138 49.3
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 5.3e-29 131.7 113 56.6
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 5.3e-29 131.7 138 49.3
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 5.3e-29 131.7 138 49.3
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 7.0e-29 131.3 140 50.0
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 7.0e-29 131.3 145 49.0
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 7.0e-29 131.3 145 49.0
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 9.1e-29 131.0 92 60.9
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.2e-28 130.6 181 42.5
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 1.5e-28 130.2 186 43.5
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 1.5e-28 130.2 183 41.5
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.5e-28 130.2 88 64.8
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.0e-28 129.8 179 44.7
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 4.5e-28 128.6 158 41.8
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.3e-27 127.1 181 40.9
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.3e-27 127.1 152 44.1
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 1.7e-27 126.7 155 47.7
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 2.9e-27 125.9 116 55.2
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 2.9e-27 125.9 168 42.3
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 2.9e-27 125.9 179 43.0
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 3.8e-27 125.6 140 50.7
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 3.8e-27 125.6 174 42.5
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 5.0e-27 125.2 178 42.1
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 8.5e-27 124.4 174 45.4
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 8.5e-27 124.4 148 49.3
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 1.5e-26 123.6 120 53.3
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 1.9e-26 123.2 181 40.9
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 1.9e-26 123.2 115 53.9
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.2e-26 122.5 181 40.9
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 1.6e-25 120.2 175 44.6
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 4.7e-25 118.6 129 46.5
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 4.7e-25 118.6 88 62.5
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 8.0e-25 117.9 171 42.1
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 1.0e-24 117.5 90 58.9
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 2.3e-24 116.3 150 47.3
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 8.8e-24 114.4 122 45.1
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 7.5e-23 111.3 79 63.3
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 3.1e-21 105.9 87 54.0
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 2.9e-19 99.4 157 36.9
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 9.4e-18 94.4 84 50.0
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 4.7e-17 92.0 123 49.6
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 6.1e-17 91.7 93 46.2
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 2.3e-16 89.7 161 35.4
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 3.0e-16 89.4 67 61.2
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 6.1e-09 65.1 103 43.7
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.4e-08 63.9 118 41.5
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 2.0e-07 60.1 122 38.5
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 7.5e-07 58.2 91 36.3
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 3.7e-06 55.8 89 39.3
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 8.3e-06 54.7 131 40.5


User provided reference genes

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