Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13524 Avicennia marina HOM05D007913 ORTHO05D009599 2.1e-53 212.2 118 100.0
MSTRG.13525 Avicennia marina HOM05D007913 ORTHO05D009599 1.3e-31 139.8 82 81.7
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 2.0e-27 125.9 117 59.8
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 2.2e-18 95.9 119 51.3
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 1.3e-15 86.7 121 47.9
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 5.1e-15 84.7 116 49.1
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 9.6e-14 80.5 113 45.1
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 2.1e-13 79.3 120 40.0
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 6.2e-13 77.8 111 44.1
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 6.2e-13 77.8 117 44.4
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 6.2e-13 77.8 117 44.4
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 1.1e-12 77.0 111 45.9
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 1.1e-12 77.0 113 43.4
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 3.1e-12 75.5 121 41.3
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 4.0e-12 75.1 107 44.9
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 6.9e-12 74.3 118 42.4
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 4.5e-11 71.6 114 43.0
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 5.8e-11 71.2 119 44.5
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 1.3e-10 70.1 106 45.3
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 2.9e-10 68.9 114 41.2
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.9e-10 68.9 109 43.1
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 3.8e-10 68.6 89 47.2
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.9e-10 68.2 120 42.5
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 6.4e-10 67.8 107 42.1
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 2.4e-09 65.9 88 44.3
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 5.5e-09 64.7 117 40.2
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 5.5e-09 64.7 106 40.6
SGA_v2.0_scaffold14G06855 Striga asiatica HOM05D007913 ORTHO05D009599 1.2e-08 63.5 80 47.5
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 2.7e-08 62.4 114 40.4
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 2.7e-08 62.4 121 43.8
Nn4g23816 Nelumbo nucifera HOM05D007913 ORTHO05D009599 6.0e-08 61.2 119 37.8
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 1.0e-07 60.5 110 41.8
Glyma.09G185100 Glycine max HOM05D013982 ORTHO05D012395 1.3e-07 60.1 93 38.7
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 2.3e-07 59.3 120 39.2
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 3.0e-07 58.9 90 40.0
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 3.0e-07 58.9 121 38.8
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 3.9e-07 58.5 57 52.6
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 6.7e-07 57.8 117 36.8
Nitab4.5_0006400g0040 Nicotiana tabacum HOM05D007913 ORTHO05D009599 6.7e-07 57.8 59 49.2
Peaxi162Scf00382g00033 Petunia axillaris HOM05D007913 ORTHO05D009599 8.7e-07 57.4 82 41.5
Manes.14G101600 Manihot esculenta HOM05D007913 ORTHO05D009599 1.9e-06 56.2 82 40.2
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 2.5e-06 55.8 131 35.9
Lsat_1_v5_gn_4_18120 Lactuca sativa HOM05D067616 ORTHO05D048360 2.5e-06 55.8 125 31.2
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 3.3e-06 55.5 121 41.3
FvH4_4g27520 Fragaria vesca HOM05D007913 ORTHO05D009599 4.3e-06 55.1 104 40.4
FAN12G2484 Fragaria x ananassa HOM05D007913 ORTHO05D009599 4.3e-06 55.1 104 40.4
FAN12G3451 Fragaria x ananassa HOM05D007913 ORTHO05D009599 4.3e-06 55.1 104 40.4
Nitab4.5_0000657g0090 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.3e-06 55.1 57 45.6
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 5.6e-06 54.7 83 39.8
RcHm_v2.0_Chr4g0435331 Rosa chinensis HOM05D007913 ORTHO05D009599 5.6e-06 54.7 103 35.0
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 7.4e-06 54.3 104 38.5


User provided reference genes

Program Settings